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The map label for this gene is ycdI [C]

Identifier: 85374520

GI number: 85374520

Start: 1735692

End: 1736300

Strand: Direct

Name: ycdI [C]

Synonym: ELI_08465

Alternate gene names: 85374520

Gene position: 1735692-1736300 (Clockwise)

Preceding gene: 85374519

Following gene: 85374521

Centisome position: 56.86

GC content: 60.76

Gene sequence:

>609_bases
ATGACCAAACAATTCCACGGCCACACGCTGTCCGACGACGCGCTCGACCAGATTTTCAACGAAGCGCGCACTTATAATGG
TTGGCTCAACAAGCCGGTCAGCGAAGACCAGCTGCGCCATATCTACGACCTGATGAAGATGGGGCCGACTTCGGCCAACA
TGCAGCCCGCGCGGCTCGTTTTCGTCACGTCCGAAGAAGGCAAGACCAAGCTGTCCGAGCTTGCTTCGGAAGGCAATCAG
GACAAGATCACGGCCGCGCCCGTCACCGCGATCATCGGTTACGACATCGACTTCCACGAGGAACTTCCGTGGCTCTTCCC
GCACGCCGACGCCAAGAGCTGGTTCGAAGGCGACGAGGAAGCGCGCAAAGCCAATGCGAAGCGTAATTCGGCGCTACAGG
GCGCCTATATGATTATCGCCGCTCGCGCACTGGGCCTCGATTGCGGGCCGATGTCGGGCGTCGATCTCGACGGGATCACC
GAGCACTTCTTCGCCGACCAGCCGCGCGTGAAGGCCGACTGGGTCTGTTCGATCGGCTACGGCGATCCGGACACGATCTT
CGATCGCAGCCCGCGGCCCGAATTCGGCAAGTTTACCAGCTTCGCCTGA

Upstream 100 bases:

>100_bases
ACCGCGACGCTCAAGCAGGGTATCGAAGGCCTGCTGAAACATTATGTCCCCGAGGTCGTTGAAGTTCGCGCAGCCTGAAT
TTCAATCCCGAGGGGACTTC

Downstream 100 bases:

>100_bases
CGCAGTAAGGGCGGGCGCGATGAAAACGCTCGCCATAGATTGCTCGACCGAGGCCTGTTCGATCGCGCTGTTCGATGCGG
GCGGACTCGTCGCGCACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTKQFHGHTLSDDALDQIFNEARTYNGWLNKPVSEDQLRHIYDLMKMGPTSANMQPARLVFVTSEEGKTKLSELASEGNQ
DKITAAPVTAIIGYDIDFHEELPWLFPHADAKSWFEGDEEARKANAKRNSALQGAYMIIAARALGLDCGPMSGVDLDGIT
EHFFADQPRVKADWVCSIGYGDPDTIFDRSPRPEFGKFTSFA

Sequences:

>Translated_202_residues
MTKQFHGHTLSDDALDQIFNEARTYNGWLNKPVSEDQLRHIYDLMKMGPTSANMQPARLVFVTSEEGKTKLSELASEGNQ
DKITAAPVTAIIGYDIDFHEELPWLFPHADAKSWFEGDEEARKANAKRNSALQGAYMIIAARALGLDCGPMSGVDLDGIT
EHFFADQPRVKADWVCSIGYGDPDTIFDRSPRPEFGKFTSFA
>Mature_201_residues
TKQFHGHTLSDDALDQIFNEARTYNGWLNKPVSEDQLRHIYDLMKMGPTSANMQPARLVFVTSEEGKTKLSELASEGNQD
KITAAPVTAIIGYDIDFHEELPWLFPHADAKSWFEGDEEARKANAKRNSALQGAYMIIAARALGLDCGPMSGVDLDGITE
HFFADQPRVKADWVCSIGYGDPDTIFDRSPRPEFGKFTSFA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=186, Percent_Identity=49.4623655913978, Blast_Score=191, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22519; Mature: 22388

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQFHGHTLSDDALDQIFNEARTYNGWLNKPVSEDQLRHIYDLMKMGPTSANMQPARLV
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
FVTSEEGKTKLSELASEGNQDKITAAPVTAIIGYDIDFHEELPWLFPHADAKSWFEGDEE
EEECCCCHHHHHHHHHCCCCCCEEHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHH
ARKANAKRNSALQGAYMIIAARALGLDCGPMSGVDLDGITEHFFADQPRVKADWVCSIGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
GDPDTIFDRSPRPEFGKFTSFA
CCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKQFHGHTLSDDALDQIFNEARTYNGWLNKPVSEDQLRHIYDLMKMGPTSANMQPARLV
CCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
FVTSEEGKTKLSELASEGNQDKITAAPVTAIIGYDIDFHEELPWLFPHADAKSWFEGDEE
EEECCCCHHHHHHHHHCCCCCCEEHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHH
ARKANAKRNSALQGAYMIIAARALGLDCGPMSGVDLDGITEHFFADQPRVKADWVCSIGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
GDPDTIFDRSPRPEFGKFTSFA
CCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]