Click here to switch to the map view.

The map label for this gene is yhgI [C]

Identifier: 85374519

GI number: 85374519

Start: 1735091

End: 1735669

Strand: Direct

Name: yhgI [C]

Synonym: ELI_08460

Alternate gene names: 85374519

Gene position: 1735091-1735669 (Clockwise)

Preceding gene: 85374511

Following gene: 85374520

Centisome position: 56.84

GC content: 61.31

Gene sequence:

>579_bases
ATGTTCATAGAGACCGAAACGACGCCCAATCCCTCGACGCTCAAGTTCCTGCCGGGGCAGCAAGTCATGCCTGGCGGAAC
GCGCGAGTTCACGTCGCCCGAGGAAGCCGAAGCGAGCCCGCTGGCGCAGGCGATCTTCGATACAGGCGAAGTGACCAATG
TATTCTTCGGCAGCGACTTCGTGTCGGTTTCCGCCGCGCCGGGTGCCGACTGGAGCAGCCTCAAAGGCATGGTCGTCTCG
ATCCTGCTCGATCATTTCGTTTCGCAGGCCCCGCTGTTCGTCGGCGGCGATGCCAGCGGCATCTCCGTTCCCGCCGAGGA
TGACCTGCTGGTCGAAGAAAATGCCGACGACGCGGACATCGTCGCACAGATCAACGAATTGCTGGAAACGCGCGTTCGCC
CTGCGGTGGCAGGCGATGGCGGCGATATCGCCTATCGCGGGTTCAAGGACGGCGTGGTCTATCTGACATTGCAGGGAGCT
TGTTCGGGCTGTCCTTCTTCCACCGCGACGCTCAAGCAGGGTATCGAAGGCCTGCTGAAACATTATGTCCCCGAGGTCGT
TGAAGTTCGCGCAGCCTGA

Upstream 100 bases:

>100_bases
GCGCGCGAAAATCTGATCATGGCGCGGACTATAGAAACACTATCGGTGAAGGGATAGTGAATAGCTTGTTCGCGCGTCGC
CCCGTCCCTACATCGTGAGC

Downstream 100 bases:

>100_bases
ATTTCAATCCCGAGGGGACTTCATGACCAAACAATTCCACGGCCACACGCTGTCCGACGACGCGCTCGACCAGATTTTCA
ACGAAGCGCGCACTTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NifU Domain Protein; Nitrogen-Fixing NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU-Like Protein; NifU Related Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Iron-Sulfur Cluster Assembly Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDFVSVSAAPGADWSSLKGMVVS
ILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADIVAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGA
CSGCPSSTATLKQGIEGLLKHYVPEVVEVRAA

Sequences:

>Translated_192_residues
MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDFVSVSAAPGADWSSLKGMVVS
ILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADIVAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGA
CSGCPSSTATLKQGIEGLLKHYVPEVVEVRAA
>Mature_192_residues
MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDFVSVSAAPGADWSSLKGMVVS
ILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADIVAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGA
CSGCPSSTATLKQGIEGLLKHYVPEVVEVRAA

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=187, Percent_Identity=45.4545454545455, Blast_Score=168, Evalue=2e-42,
Organism=Homo sapiens, GI50593021, Length=187, Percent_Identity=45.4545454545455, Blast_Score=168, Evalue=2e-42,
Organism=Homo sapiens, GI50593023, Length=104, Percent_Identity=48.0769230769231, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI50593019, Length=104, Percent_Identity=48.0769230769231, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17541876, Length=192, Percent_Identity=45.3125, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6322811, Length=208, Percent_Identity=37.5, Blast_Score=120, Evalue=1e-28,
Organism=Drosophila melanogaster, GI45551492, Length=190, Percent_Identity=46.3157894736842, Blast_Score=167, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24643765, Length=190, Percent_Identity=46.3157894736842, Blast_Score=167, Evalue=5e-42,
Organism=Drosophila melanogaster, GI45556188, Length=190, Percent_Identity=46.3157894736842, Blast_Score=167, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20137; Mature: 20137

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDF
CEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCE
VSVSAAPGADWSSLKGMVVSILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADI
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCCCCHHH
VAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGACSGCPSSTATLKQGIEGLLK
HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
HYVPEVVEVRAA
HHHHHHHHHCCC
>Mature Secondary Structure
MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDF
CEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCE
VSVSAAPGADWSSLKGMVVSILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADI
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCCCCHHH
VAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGACSGCPSSTATLKQGIEGLLK
HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
HYVPEVVEVRAA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA