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The map label for this gene is secY

Identifier: 85374444

GI number: 85374444

Start: 1673814

End: 1675178

Strand: Reverse

Name: secY

Synonym: ELI_08085

Alternate gene names: 85374444

Gene position: 1675178-1673814 (Counterclockwise)

Preceding gene: 85374445

Following gene: 85374443

Centisome position: 54.88

GC content: 60.22

Gene sequence:

>1365_bases
ATGGCATCACGCGCCGATAATATTGCGAGCAATCTCAGCCTCGCCAATTTCTCGAAAGCCACCGAGCTGCAGAACCGCAT
CTGGTTCACCATCGGTGCGCTGATCGTCTTCCGCTTCCTCAGTTTCGTGCCGCTGCCCGGTATCAATCCGCTGGCGCTCG
CCGAACTGGCCGACCTTACGTCGGGCGGCGTGATCGACATGTTCAACATGTTCACCGGCGGCAGCCTCGAGCGGATGAGC
CTGATTGCTCTCGGCGTCATGCCTTACATTACCGCCTCGATCGTGGTGCAGATGGCCGCAGCCCTGCATCCGACGCTGAT
GGCGCTGAAGAAGGAAGGCGCGACCGGTCGGCAGAAGCTCAATCAGTACACCCGATACGGCACGGTGTTCCTGTGCATGA
TGCAGGGCTGGTTCCTGGCTGCGGGCCTGGAGGCGTTTTCCAATTCCGCAGGCCTGCAGGCGGTCGTCGATCCCGGCTAT
ATGTTCCGCGTCGGCGCGGTCATCAGCCTGGTGGGCGGGACGATGTTCCTGTTGTGGCTTGGCGAGCAGATCACCAGTCG
CGGTATCGGCAACGGCGTTTCGCTGATCATCATGGCGGGCATCGTGGCGCAGTTTCCAAGCTTCGCCGGCAATATGTTCG
AAGGCGGTCGCACCGGTTCGATCAGCGCTTTCCTGATCGTCGGGTTCCTGATCATGGTCGTCATCCTGATCCTGGTCATC
TGCTTCATGGAGCGTGCCCAGCGGCGCCTGCTGATCCAGTATCCCAAGCGTGCCACCCAGCGCGGCATGATGCAGGCGGA
CCGCTCGCACCTGCCGCTGAAGCTCAACACCGCTGGCGTGATCCCGCCGATCTTCGCCAGTTCGTTGCTGCTGTTGCCGC
TGACGATTAGCCAGTTTTCGGCCAATTCGCTCGATCCGACCTCCGGCGCGGGCGCGGTGATCCAGACGCTGAACCAATAC
CTGCAGCACGGCCAGCCGATCTACATGACGCTGTACGGTATCGGCATCATCTTCTTCTGTTTCTTCTACACCGCGGTGGT
CTTCAATCCGGAAGACACGGCCGACAATCTCAAGAAGAACGGCGGTTTCATCCCGGGCATCCGCCCCGGCAAGCGGACCG
CGGAATATCTCGACTATGTCCTGACCCGCATCACCGTAGTCGGCGCGATCTACTTGACGGTCGTCTGCGTGTTGCCTGAA
TATGTGATCGCGCAAACCGGCATCCCGCTGTTCCTCGGCGGCACCAGCCTGCTGATCGTCGTCAACGTTACTGTGGATAC
GATCAGCCAGATCCAGTCGCATTTGCTTGCTCACCAGTACGGTGATCTTATCAAGAAGGCCAAGCTGAAAGGCCGGATGC
GCTGA

Upstream 100 bases:

>100_bases
AAAATCGGGGCGACGGGTTCGACATCGAGCCCGTCGCTTCCTATGTGTCCTTCCGATAAGCCGGGAGGGACCGGCGACAA
GCTAGGATTTCATCGTTCCC

Downstream 100 bases:

>100_bases
GCCGACGCTGGCGGATCGATTGAGGGGAATCGCGCACGTGAATATCATCCTTCTCGGCCCTCCGGGCGCAGGCAAGGGCA
CGCAATCGCAGCGGCTCGTC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MASRADNIASNLSLANFSKATELQNRIWFTIGALIVFRFLSFVPLPGINPLALAELADLTSGGVIDMFNMFTGGSLERMS
LIALGVMPYITASIVVQMAAALHPTLMALKKEGATGRQKLNQYTRYGTVFLCMMQGWFLAAGLEAFSNSAGLQAVVDPGY
MFRVGAVISLVGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQFPSFAGNMFEGGRTGSISAFLIVGFLIMVVILILVI
CFMERAQRRLLIQYPKRATQRGMMQADRSHLPLKLNTAGVIPPIFASSLLLLPLTISQFSANSLDPTSGAGAVIQTLNQY
LQHGQPIYMTLYGIGIIFFCFFYTAVVFNPEDTADNLKKNGGFIPGIRPGKRTAEYLDYVLTRITVVGAIYLTVVCVLPE
YVIAQTGIPLFLGGTSLLIVVNVTVDTISQIQSHLLAHQYGDLIKKAKLKGRMR

Sequences:

>Translated_454_residues
MASRADNIASNLSLANFSKATELQNRIWFTIGALIVFRFLSFVPLPGINPLALAELADLTSGGVIDMFNMFTGGSLERMS
LIALGVMPYITASIVVQMAAALHPTLMALKKEGATGRQKLNQYTRYGTVFLCMMQGWFLAAGLEAFSNSAGLQAVVDPGY
MFRVGAVISLVGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQFPSFAGNMFEGGRTGSISAFLIVGFLIMVVILILVI
CFMERAQRRLLIQYPKRATQRGMMQADRSHLPLKLNTAGVIPPIFASSLLLLPLTISQFSANSLDPTSGAGAVIQTLNQY
LQHGQPIYMTLYGIGIIFFCFFYTAVVFNPEDTADNLKKNGGFIPGIRPGKRTAEYLDYVLTRITVVGAIYLTVVCVLPE
YVIAQTGIPLFLGGTSLLIVVNVTVDTISQIQSHLLAHQYGDLIKKAKLKGRMR
>Mature_453_residues
ASRADNIASNLSLANFSKATELQNRIWFTIGALIVFRFLSFVPLPGINPLALAELADLTSGGVIDMFNMFTGGSLERMSL
IALGVMPYITASIVVQMAAALHPTLMALKKEGATGRQKLNQYTRYGTVFLCMMQGWFLAAGLEAFSNSAGLQAVVDPGYM
FRVGAVISLVGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQFPSFAGNMFEGGRTGSISAFLIVGFLIMVVILILVIC
FMERAQRRLLIQYPKRATQRGMMQADRSHLPLKLNTAGVIPPIFASSLLLLPLTISQFSANSLDPTSGAGAVIQTLNQYL
QHGQPIYMTLYGIGIIFFCFFYTAVVFNPEDTADNLKKNGGFIPGIRPGKRTAEYLDYVLTRITVVGAIYLTVVCVLPEY
VIAQTGIPLFLGGTSLLIVVNVTVDTISQIQSHLLAHQYGDLIKKAKLKGRMR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=435, Percent_Identity=50.8045977011494, Blast_Score=414, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49233; Mature: 49102

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRADNIASNLSLANFSKATELQNRIWFTIGALIVFRFLSFVPLPGINPLALAELADLT
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SGGVIDMFNMFTGGSLERMSLIALGVMPYITASIVVQMAAALHPTLMALKKEGATGRQKL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NQYTRYGTVFLCMMQGWFLAAGLEAFSNSAGLQAVVDPGYMFRVGAVISLVGGTMFLLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
GEQITSRGIGNGVSLIIMAGIVAQFPSFAGNMFEGGRTGSISAFLIVGFLIMVVILILVI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CFMERAQRRLLIQYPKRATQRGMMQADRSHLPLKLNTAGVIPPIFASSLLLLPLTISQFS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHC
ANSLDPTSGAGAVIQTLNQYLQHGQPIYMTLYGIGIIFFCFFYTAVVFNPEDTADNLKKN
CCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHC
GGFIPGIRPGKRTAEYLDYVLTRITVVGAIYLTVVCVLPEYVIAQTGIPLFLGGTSLLIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
VNVTVDTISQIQSHLLAHQYGDLIKKAKLKGRMR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASRADNIASNLSLANFSKATELQNRIWFTIGALIVFRFLSFVPLPGINPLALAELADLT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SGGVIDMFNMFTGGSLERMSLIALGVMPYITASIVVQMAAALHPTLMALKKEGATGRQKL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NQYTRYGTVFLCMMQGWFLAAGLEAFSNSAGLQAVVDPGYMFRVGAVISLVGGTMFLLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
GEQITSRGIGNGVSLIIMAGIVAQFPSFAGNMFEGGRTGSISAFLIVGFLIMVVILILVI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CFMERAQRRLLIQYPKRATQRGMMQADRSHLPLKLNTAGVIPPIFASSLLLLPLTISQFS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHC
ANSLDPTSGAGAVIQTLNQYLQHGQPIYMTLYGIGIIFFCFFYTAVVFNPEDTADNLKKN
CCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHC
GGFIPGIRPGKRTAEYLDYVLTRITVVGAIYLTVVCVLPEYVIAQTGIPLFLGGTSLLIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
VNVTVDTISQIQSHLLAHQYGDLIKKAKLKGRMR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA