Click here to switch to the map view.

The map label for this gene is copB [H]

Identifier: 85373750

GI number: 85373750

Start: 954892

End: 956049

Strand: Direct

Name: copB [H]

Synonym: ELI_04615

Alternate gene names: 85373750

Gene position: 954892-956049 (Clockwise)

Preceding gene: 85373749

Following gene: 85373751

Centisome position: 31.28

GC content: 62.09

Gene sequence:

>1158_bases
ATGAAGACTTTCAATTTCAGCTTCTTCGCCTCCGTCGCAGCAGGTGCAGTCCTCGCTTCGCCCGCCGCAGCCCAGCATGC
CGGTCACTCGCCGGCGGAGCCGCAGCAGAGCGCCGAGGCGCAGGCTGACGCCAAGGTAAAGTGCGAGGAGGAAGCCGCGC
GCCATCGTGCGATGGGGCATCCGGTAACAGAGGGGGCGTGCGAACGTACTGCCCAGCCTGAAGCTGCGATGGACCATTCG
ACGATGGATCATTCGCAGATGAATCACGGCGACATGGGGCAGGCGGAAGCCAGCAGCTCGTCGACAGACCATGGGCAGAT
GGATCACAGCCAGATGAACCACGGGCAGACGGGATCGCAGGACATGCAGGGCATGGACCATTCGTGGATGCAGATGGGCT
CGAACGACGATATCCCGCTGCTGCCGCCTCCTCCCGAAGCCGGGAGCGGTCCCGCGCGCGCGGCGGTTGCGATCTGGGGC
GAGGAAGCCATGAACGAAGCGCGGCGCGAACTTGTACGCGAGACCGACGGCGGGATGCGCTTCTGGTTTCAGGGCGACCG
GCTCGAATACCGCGCCCGCGAGGGAGCGGATGGATATCTTTGGGATATCCAGGGCTATTATGGCGGTGATATCGACAAGT
TCTGGTTCAAGTCCGAGGGTGAAGGCAGCTTCGGTGAGCCTGTCGAGGGCGCCGAAGTCCAGGCGCTCTGGAGCCGGGCG
ATCGCTCCCTTCTTCGATTTCCAAGCCGGTGTCCGCCAGGATCTGACAGGGCCCGAGCGCACCCATGCGGTCATTGGAAT
ACAGGGCATTGCTCCCTACCAGTTCGAGGTAGACGTTGCAGCGTTCGTATCGAACAAAGGCAATGTGACGGCGCGTTTTG
AGGGCGAGCTTGATCAGCGCATCACGCAGCGGCTGATCCTCCAGCCGCGTGCCGAAATCGCACTTTCGGTGCAGGATATT
CCCGAACTCGGCATTGGCGCTGGCCTCGACCGGATCGAGGCAGGTCTGCGTCTTCGCTACGAGTTCGCACGCGAATTCGC
GCCCTATGTTGGCGTATCCCAGGAATGGCGGATCGGTGACAGCGCCGATTATGCCCGCGCCGCAGGGGAAGACTCTAGCG
TGACGAATTACGTCGTGGGAATTCGATTCTGGTTTTAA

Upstream 100 bases:

>100_bases
ACGAGCCGGGCGACTGGGCCTTCCACTGCCACCTTCTCTACCACATGCATGCCGGGATGTTTCAGATTGTCACGGTTGCC
AATCCGGACGGGAGCGAAGC

Downstream 100 bases:

>100_bases
GAGAAGGAAATATACAATGAGGACAAGACTATCCCTAAGCGCGGTCGCCCTGGCCTTGGCTGCAGGGGGCACTCCCGCCC
TGGCACAATCCATGGACCAT

Product: copper resistance protein B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKTFNFSFFASVAAGAVLASPAAAQHAGHSPAEPQQSAEAQADAKVKCEEEAARHRAMGHPVTEGACERTAQPEAAMDHS
TMDHSQMNHGDMGQAEASSSSTDHGQMDHSQMNHGQTGSQDMQGMDHSWMQMGSNDDIPLLPPPPEAGSGPARAAVAIWG
EEAMNEARRELVRETDGGMRFWFQGDRLEYRAREGADGYLWDIQGYYGGDIDKFWFKSEGEGSFGEPVEGAEVQALWSRA
IAPFFDFQAGVRQDLTGPERTHAVIGIQGIAPYQFEVDVAAFVSNKGNVTARFEGELDQRITQRLILQPRAEIALSVQDI
PELGIGAGLDRIEAGLRLRYEFAREFAPYVGVSQEWRIGDSADYARAAGEDSSVTNYVVGIRFWF

Sequences:

>Translated_385_residues
MKTFNFSFFASVAAGAVLASPAAAQHAGHSPAEPQQSAEAQADAKVKCEEEAARHRAMGHPVTEGACERTAQPEAAMDHS
TMDHSQMNHGDMGQAEASSSSTDHGQMDHSQMNHGQTGSQDMQGMDHSWMQMGSNDDIPLLPPPPEAGSGPARAAVAIWG
EEAMNEARRELVRETDGGMRFWFQGDRLEYRAREGADGYLWDIQGYYGGDIDKFWFKSEGEGSFGEPVEGAEVQALWSRA
IAPFFDFQAGVRQDLTGPERTHAVIGIQGIAPYQFEVDVAAFVSNKGNVTARFEGELDQRITQRLILQPRAEIALSVQDI
PELGIGAGLDRIEAGLRLRYEFAREFAPYVGVSQEWRIGDSADYARAAGEDSSVTNYVVGIRFWF
>Mature_385_residues
MKTFNFSFFASVAAGAVLASPAAAQHAGHSPAEPQQSAEAQADAKVKCEEEAARHRAMGHPVTEGACERTAQPEAAMDHS
TMDHSQMNHGDMGQAEASSSSTDHGQMDHSQMNHGQTGSQDMQGMDHSWMQMGSNDDIPLLPPPPEAGSGPARAAVAIWG
EEAMNEARRELVRETDGGMRFWFQGDRLEYRAREGADGYLWDIQGYYGGDIDKFWFKSEGEGSFGEPVEGAEVQALWSRA
IAPFFDFQAGVRQDLTGPERTHAVIGIQGIAPYQFEVDVAAFVSNKGNVTARFEGELDQRITQRLILQPRAEIALSVQDI
PELGIGAGLDRIEAGLRLRYEFAREFAPYVGVSQEWRIGDSADYARAAGEDSSVTNYVVGIRFWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 42110; Mature: 42110

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFNFSFFASVAAGAVLASPAAAQHAGHSPAEPQQSAEAQADAKVKCEEEAARHRAMGH
CCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCC
PVTEGACERTAQPEAAMDHSTMDHSQMNHGDMGQAEASSSSTDHGQMDHSQMNHGQTGSQ
CCCCHHHHHCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCH
DMQGMDHSWMQMGSNDDIPLLPPPPEAGSGPARAAVAIWGEEAMNEARRELVRETDGGMR
HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEE
FWFQGDRLEYRAREGADGYLWDIQGYYGGDIDKFWFKSEGEGSFGEPVEGAEVQALWSRA
EEEECCCEEEHHCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHH
IAPFFDFQAGVRQDLTGPERTHAVIGIQGIAPYQFEVDVAAFVSNKGNVTARFEGELDQR
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCHHHH
ITQRLILQPRAEIALSVQDIPELGIGAGLDRIEAGLRLRYEFAREFAPYVGVSQEWRIGD
HHHHHHHCCCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SADYARAAGEDSSVTNYVVGIRFWF
CCHHHHHCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MKTFNFSFFASVAAGAVLASPAAAQHAGHSPAEPQQSAEAQADAKVKCEEEAARHRAMGH
CCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCC
PVTEGACERTAQPEAAMDHSTMDHSQMNHGDMGQAEASSSSTDHGQMDHSQMNHGQTGSQ
CCCCHHHHHCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCH
DMQGMDHSWMQMGSNDDIPLLPPPPEAGSGPARAAVAIWGEEAMNEARRELVRETDGGMR
HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEE
FWFQGDRLEYRAREGADGYLWDIQGYYGGDIDKFWFKSEGEGSFGEPVEGAEVQALWSRA
EEEECCCEEEHHCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHH
IAPFFDFQAGVRQDLTGPERTHAVIGIQGIAPYQFEVDVAAFVSNKGNVTARFEGELDQR
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCHHHH
ITQRLILQPRAEIALSVQDIPELGIGAGLDRIEAGLRLRYEFAREFAPYVGVSQEWRIGD
HHHHHHHCCCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SADYARAAGEDSSVTNYVVGIRFWF
CCHHHHHCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]