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The map label for this gene is xerC [H]

Identifier: 85373646

GI number: 85373646

Start: 846213

End: 847409

Strand: Direct

Name: xerC [H]

Synonym: ELI_04095

Alternate gene names: 85373646

Gene position: 846213-847409 (Clockwise)

Preceding gene: 85373645

Following gene: 85373649

Centisome position: 27.72

GC content: 59.73

Gene sequence:

>1197_bases
ATGACCGCCGCCAGTCTCAAGAAGATCGTCGAAGAGGCGCTTGCCGAGGTCGGGGCAACGGTCAACTTCAAGCTCGTTCC
CAAAGGCAAGGCGCGCACCACGACCTGGCTTGGTGTCGAGCACGGTTTTGGCATTCGCCACTATCCGAGTGGCCGCAACG
TCTACATCGTCCAGACGCGCATGGCAGGCCGAATGCGCACGGTCACAATCGGGCCTACATCGGTCCTAACTCGCTATCAG
GCCCAAATGGTCGCGCGCCGCGTCATCGCATATGCACAGGTCGGTCGCGATCCGGCGACCGAACGCCAGCGCATCCGGTC
CGCGCCGAGCTTCGCCGATTTCGTGACCGAATATTGGGATCGCTGGGCGCCACGTTGGAAAGCATCGACCCTGGAAACGC
ACACCGGCTACCGCCGCCGCTATCTCGATGATGCCTTTGTCGGCGTCTACATCGACGAACTCAACGAGGGCCATGTCACG
AGCTGGTTCGCGGACCTCAACAATCTGACTGGACCGGGAGCATCGAACCGTACGTTCGAAATCCTCAAGCATATGCTGAA
CAAGGCAGAGGACTGGGGCTACCGGCTCGAGAACACCAATCCGTGCCGCTCCGTCCGGCCCAACCGCAAGCGCCAGTGCG
AGCGCTTCCTTACCAATGATGAACTGGCCCGTCTGGGTGCCGAGCTGACAAATCTGCGCGCATCAGAGGATCGCACCAAG
CAATGTTCGGGTGCAGCGATCACGCTCCTGTTGCTGACTGGTTGTCGCAAGAGCGAAATCCTCACGCTCGAATGGACCGA
CATCAAGGGCAACCGGCTGCACTTGCGCGATAGCAAAACCGGGCCGCGAACGGTTTGGCTTGGCTCGGCAGCGCGCGAGG
TGATCGCCGCGCTTCCGCGCTTCGAGAGGATCCCATATCCATTCTGGAACTACCGCTACCGCAAACCGCTTCGATGCGTG
AATGGCTTCTGGCGCAGGCTCAGAGACGAAGCAGGGCTACCCGACGTTCGCATCCACGACTTGCGCCATACCTTTGCTAG
CCATGCAGCGATGAACAAGGAAACCTTGCCGATGATCGGACGGTTGCTCGGTCATGCTAATGTGCAGACGACCGCGCGCT
ATGCTCATTTCGATGACGGTCATTTGCTTGAAGCGGCGCAGCAAATCGGCGATTTGCTCGAGTGCATGCTAAATTGA

Upstream 100 bases:

>100_bases
TTGAGACGACCGCCAAATATGCGCATCTGTCCGATGATGTGATCGGCGAAGCCGCCGAGCGGATTTCCGGCTCGCTGGCG
CAAGCTATTGGCCTCAGGCC

Downstream 100 bases:

>100_bases
GCAAGCGGAACAGACCTGAAAAGATCCCGGCTTTAGCCGAGTGCCTTCCTTTTAGATGTCGTGCTCCTTCGTCAATCGGC
CAGCAGCATCCCGAGAGGTG

Product: site-specific recombinase, phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTAASLKKIVEEALAEVGATVNFKLVPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQ
AQMVARRVIAYAQVGRDPATERQRIRSAPSFADFVTEYWDRWAPRWKASTLETHTGYRRRYLDDAFVGVYIDELNEGHVT
SWFADLNNLTGPGASNRTFEILKHMLNKAEDWGYRLENTNPCRSVRPNRKRQCERFLTNDELARLGAELTNLRASEDRTK
QCSGAAITLLLLTGCRKSEILTLEWTDIKGNRLHLRDSKTGPRTVWLGSAAREVIAALPRFERIPYPFWNYRYRKPLRCV
NGFWRRLRDEAGLPDVRIHDLRHTFASHAAMNKETLPMIGRLLGHANVQTTARYAHFDDGHLLEAAQQIGDLLECMLN

Sequences:

>Translated_398_residues
MTAASLKKIVEEALAEVGATVNFKLVPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQ
AQMVARRVIAYAQVGRDPATERQRIRSAPSFADFVTEYWDRWAPRWKASTLETHTGYRRRYLDDAFVGVYIDELNEGHVT
SWFADLNNLTGPGASNRTFEILKHMLNKAEDWGYRLENTNPCRSVRPNRKRQCERFLTNDELARLGAELTNLRASEDRTK
QCSGAAITLLLLTGCRKSEILTLEWTDIKGNRLHLRDSKTGPRTVWLGSAAREVIAALPRFERIPYPFWNYRYRKPLRCV
NGFWRRLRDEAGLPDVRIHDLRHTFASHAAMNKETLPMIGRLLGHANVQTTARYAHFDDGHLLEAAQQIGDLLECMLN
>Mature_397_residues
TAASLKKIVEEALAEVGATVNFKLVPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQA
QMVARRVIAYAQVGRDPATERQRIRSAPSFADFVTEYWDRWAPRWKASTLETHTGYRRRYLDDAFVGVYIDELNEGHVTS
WFADLNNLTGPGASNRTFEILKHMLNKAEDWGYRLENTNPCRSVRPNRKRQCERFLTNDELARLGAELTNLRASEDRTKQ
CSGAAITLLLLTGCRKSEILTLEWTDIKGNRLHLRDSKTGPRTVWLGSAAREVIAALPRFERIPYPFWNYRYRKPLRCVN
GFWRRLRDEAGLPDVRIHDLRHTFASHAAMNKETLPMIGRLLGHANVQTTARYAHFDDGHLLEAAQQIGDLLECMLN

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45541; Mature: 45409

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASLKKIVEEALAEVGATVNFKLVPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTR
CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCEECCCCCEEEEEEEE
MAGRMRTVTIGPTSVLTRYQAQMVARRVIAYAQVGRDPATERQRIRSAPSFADFVTEYWD
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHH
RWAPRWKASTLETHTGYRRRYLDDAFVGVYIDELNEGHVTSWFADLNNLTGPGASNRTFE
HCCCCCCCCHHHHHCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHH
ILKHMLNKAEDWGYRLENTNPCRSVRPNRKRQCERFLTNDELARLGAELTNLRASEDRTK
HHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
QCSGAAITLLLLTGCRKSEILTLEWTDIKGNRLHLRDSKTGPRTVWLGSAAREVIAALPR
HHCCHHEEHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHH
FERIPYPFWNYRYRKPLRCVNGFWRRLRDEAGLPDVRIHDLRHTFASHAAMNKETLPMIG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RLLGHANVQTTARYAHFDDGHLLEAAQQIGDLLECMLN
HHHCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAASLKKIVEEALAEVGATVNFKLVPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTR
CHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCEECCCCCEEEEEEEE
MAGRMRTVTIGPTSVLTRYQAQMVARRVIAYAQVGRDPATERQRIRSAPSFADFVTEYWD
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHH
RWAPRWKASTLETHTGYRRRYLDDAFVGVYIDELNEGHVTSWFADLNNLTGPGASNRTFE
HCCCCCCCCHHHHHCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHH
ILKHMLNKAEDWGYRLENTNPCRSVRPNRKRQCERFLTNDELARLGAELTNLRASEDRTK
HHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
QCSGAAITLLLLTGCRKSEILTLEWTDIKGNRLHLRDSKTGPRTVWLGSAAREVIAALPR
HHCCHHEEHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHH
FERIPYPFWNYRYRKPLRCVNGFWRRLRDEAGLPDVRIHDLRHTFASHAAMNKETLPMIG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RLLGHANVQTTARYAHFDDGHLLEAAQQIGDLLECMLN
HHHCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA