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The map label for this gene is tsf

Identifier: 85373581

GI number: 85373581

Start: 780984

End: 781910

Strand: Direct

Name: tsf

Synonym: ELI_03770

Alternate gene names: 85373581

Gene position: 780984-781910 (Clockwise)

Preceding gene: 162007985

Following gene: 85373584

Centisome position: 25.59

GC content: 63.21

Gene sequence:

>927_bases
ATGGCTGGTTTCACTGCCGCTGATGTGAAGAAACTGCGCGAAATGTCCGGCGCGGGCATGATGGACGCCAAGAAGGCGCT
CGAAGAAACCGGTGGCGACCTCGAAGCTGCCGTCGACGCGCTGCGCGCCAAGGGCCTCGCCGCCGTCCAGAAGAAATCTT
CCCGCACCGCTGCCGAAGGCCTCGTCGGCGTCGCTGTGGAAGGCACCAAGGGCGTGGCCGTCGAAGTGAATTCTGAAACG
GACTTCGTTGCCAAGAACGACCAGTTCCAGGATTTCGTGCGCAAGACCACTGCCGTCGCGCTCACCATCGATGGCGACGA
TGTCGAAGCGCTTAAGGCTGCCGACTATCCCGATGGCGGCACCGTCACCGACAAGCTGACCAACAATGTCGCGACGATCG
GCGAGAACCAGCAGGTCCGCCGCATGAAGACCGTTACGGTGTCGCAGGGCGTGGTCGTGCCTTACGTGCACAACGCCGTC
GCGCCGAACCTCGGCAAGATCGGCGTGCTCGTCGCGCTCGAGTCGGACGCTTCGGCCGATGTGCTCGAGCCGCTCGGCAA
GCAGCTCGCCATGCACATTGCCGCCGCTTTCCCGCAGGCTCTCGACGCGGACGGCCTCGACGCCGACCTGATCGAGCGCG
AGCGCAAGATCGCTGCCGAGAAGGCTGCCGAAAGCGGCAAGCCGGAAAACGTGCAGGAAAAGATGGTCGAAGGCGCGATC
AAGAAGTTCGCCAAGGAGAACGCTCTCCTCAGCCAGGTCTTCGTGATGGACAACAAGACCGCCATCGCGGACGTGGTTCT
TGCCGCTGGCAAGGACGCCGGCACCACGATCACGCTGAAGGACTATGTCCGCTTCCAGCTCGGCGAAGGCATCGAGAAGG
AAGAAAGCGACTTCGCCGCGGAAGTGGCTGCTGCCGTCAAGGGCTGA

Upstream 100 bases:

>100_bases
CCGTAACGGCTGCGCCACAATCCAATTCTAGTTGCCCGGCGCGCTCTCGATCCGAGCGGGCCGGGCGCAGGACCGTAAAT
CTCTACCCAAGGAAAATATC

Downstream 100 bases:

>100_bases
TCGCCTCTCGAAGATTACACTTGGTTTACACCAAAACGAGCGGCCGCCGGACAACAGTTCGGCGGCCGTTTTCGTGTGGT
CCGCTTCGGGAAAGACGCGT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAGFTAADVKKLREMSGAGMMDAKKALEETGGDLEAAVDALRAKGLAAVQKKSSRTAAEGLVGVAVEGTKGVAVEVNSET
DFVAKNDQFQDFVRKTTAVALTIDGDDVEALKAADYPDGGTVTDKLTNNVATIGENQQVRRMKTVTVSQGVVVPYVHNAV
APNLGKIGVLVALESDASADVLEPLGKQLAMHIAAAFPQALDADGLDADLIERERKIAAEKAAESGKPENVQEKMVEGAI
KKFAKENALLSQVFVMDNKTAIADVVLAAGKDAGTTITLKDYVRFQLGEGIEKEESDFAAEVAAAVKG

Sequences:

>Translated_308_residues
MAGFTAADVKKLREMSGAGMMDAKKALEETGGDLEAAVDALRAKGLAAVQKKSSRTAAEGLVGVAVEGTKGVAVEVNSET
DFVAKNDQFQDFVRKTTAVALTIDGDDVEALKAADYPDGGTVTDKLTNNVATIGENQQVRRMKTVTVSQGVVVPYVHNAV
APNLGKIGVLVALESDASADVLEPLGKQLAMHIAAAFPQALDADGLDADLIERERKIAAEKAAESGKPENVQEKMVEGAI
KKFAKENALLSQVFVMDNKTAIADVVLAAGKDAGTTITLKDYVRFQLGEGIEKEESDFAAEVAAAVKG
>Mature_307_residues
AGFTAADVKKLREMSGAGMMDAKKALEETGGDLEAAVDALRAKGLAAVQKKSSRTAAEGLVGVAVEGTKGVAVEVNSETD
FVAKNDQFQDFVRKTTAVALTIDGDDVEALKAADYPDGGTVTDKLTNNVATIGENQQVRRMKTVTVSQGVVVPYVHNAVA
PNLGKIGVLVALESDASADVLEPLGKQLAMHIAAAFPQALDADGLDADLIERERKIAAEKAAESGKPENVQEKMVEGAIK
KFAKENALLSQVFVMDNKTAIADVVLAAGKDAGTTITLKDYVRFQLGEGIEKEESDFAAEVAAAVKG

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=303, Percent_Identity=28.7128712871287, Blast_Score=99, Evalue=3e-21,
Organism=Escherichia coli, GI1786366, Length=307, Percent_Identity=40.7166123778502, Blast_Score=191, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17561440, Length=301, Percent_Identity=23.2558139534884, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921466, Length=307, Percent_Identity=27.0358306188925, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_ERYLH (Q2NBU5)

Other databases:

- EMBL:   CP000157
- RefSeq:   YP_457643.1
- ProteinModelPortal:   Q2NBU5
- SMR:   Q2NBU5
- STRING:   Q2NBU5
- GeneID:   3871395
- GenomeReviews:   CP000157_GR
- KEGG:   eli:ELI_03770
- NMPDR:   fig|314225.3.peg.2325
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- PhylomeDB:   Q2NBU5
- ProtClustDB:   PRK09377
- BioCyc:   ELIT314225:ELI_03770-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32220; Mature: 32089

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFTAADVKKLREMSGAGMMDAKKALEETGGDLEAAVDALRAKGLAAVQKKSSRTAAEG
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
LVGVAVEGTKGVAVEVNSETDFVAKNDQFQDFVRKTTAVALTIDGDDVEALKAADYPDGG
EEEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCCC
TVTDKLTNNVATIGENQQVRRMKTVTVSQGVVVPYVHNAVAPNLGKIGVLVALESDASAD
CCHHHHHCCHHCCCCCHHHHHHHHEECCCCEEEEHHHHHCCCCCCCEEEEEEECCCCCHH
VLEPLGKQLAMHIAAAFPQALDADGLDADLIERERKIAAEKAAESGKPENVQEKMVEGAI
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KKFAKENALLSQVFVMDNKTAIADVVLAAGKDAGTTITLKDYVRFQLGEGIEKEESDFAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHH
EVAAAVKG
HHHHHHCC
>Mature Secondary Structure 
AGFTAADVKKLREMSGAGMMDAKKALEETGGDLEAAVDALRAKGLAAVQKKSSRTAAEG
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
LVGVAVEGTKGVAVEVNSETDFVAKNDQFQDFVRKTTAVALTIDGDDVEALKAADYPDGG
EEEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCCC
TVTDKLTNNVATIGENQQVRRMKTVTVSQGVVVPYVHNAVAPNLGKIGVLVALESDASAD
CCHHHHHCCHHCCCCCHHHHHHHHEECCCCEEEEHHHHHCCCCCCCEEEEEEECCCCCHH
VLEPLGKQLAMHIAAAFPQALDADGLDADLIERERKIAAEKAAESGKPENVQEKMVEGAI
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KKFAKENALLSQVFVMDNKTAIADVVLAAGKDAGTTITLKDYVRFQLGEGIEKEESDFAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHH
EVAAAVKG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA