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The map label for this gene is rimP

Identifier: 85373512

GI number: 85373512

Start: 708778

End: 709344

Strand: Direct

Name: rimP

Synonym: ELI_03425

Alternate gene names: 85373512

Gene position: 708778-709344 (Clockwise)

Preceding gene: 85373511

Following gene: 85373514

Centisome position: 23.22

GC content: 61.02

Gene sequence:

>567_bases
ATGGCCGATTTGGCTCGCCTGACTGCACTGATCGAACCTGAAGCGAAAGCGCTCGGGTTCGAGCTCGTGCGCGTCAAGAT
GATGCCGAGCGAGGCCGGAGACGGCGGGCAGGCGCTGCAGATCATGGCCGAGGACCCGGCAACGGGCCAGCTCCTGATCG
AACAATGCGCCGAGCTCAGCCGCAAGGTCTCCGACGTGATCGATGCCGCCGAGGAATCGGGCGAGGTGCTGATCGAAGGG
GCCTATCACCTCGAAGTCAGCTCTCCCGGCATCGACCGCCCGCTGACCCGGCCGAAGGACTTTGCCGACTGGGCCGGTCA
CGAAGCCAAGGTGAGCCTTGTCGAAAAGATAGACGGCCATCGCAATATGCGTGGTATATTGCTTGGCATAGACGGCGAAA
CCGTGACGATCGCGGATAACCGCGCGGGCGAGGTTTCTTTCGCCCTGGAACAAATCCACAGCGCCAAGCTGGTCCTCACC
GACAAGCTGATCGCTGCGACACAACCCCTCGACGCTGACGGTGCTGAGGAAGTATTAGAAGACAAAGAAGAGAAGGCTGA
CGACTGA

Upstream 100 bases:

>100_bases
CGCCTCATCCCGACATTGTCGTGACACTGAAGGGCTGGCGCCGAGAGGGGCCGGCACCGAACCGCTTTGTCACGGGCAAT
GCCGCGCAACCGGAGACCCT

Downstream 100 bases:

>100_bases
TGGCCAGTGCAATTTCCGCCAACAAGGCCGAGCTGCTCGCGATTGCGAATGCGGTCGCTTCGGAAAAGATGATCGACAAG
GCGATCGTCATCGAAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELSRKVSDVIDAAEESGEVLIEG
AYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGHRNMRGILLGIDGETVTIADNRAGEVSFALEQIHSAKLVLT
DKLIAATQPLDADGAEEVLEDKEEKADD

Sequences:

>Translated_188_residues
MADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELSRKVSDVIDAAEESGEVLIEG
AYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGHRNMRGILLGIDGETVTIADNRAGEVSFALEQIHSAKLVLT
DKLIAATQPLDADGAEEVLEDKEEKADD
>Mature_187_residues
ADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELSRKVSDVIDAAEESGEVLIEGA
YHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGHRNMRGILLGIDGETVTIADNRAGEVSFALEQIHSAKLVLTD
KLIAATQPLDADGAEEVLEDKEEKADD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=153, Percent_Identity=34.640522875817, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ERYLH (Q2NC14)

Other databases:

- EMBL:   CP000157
- RefSeq:   YP_457574.1
- STRING:   Q2NC14
- GeneID:   3870277
- GenomeReviews:   CP000157_GR
- KEGG:   eli:ELI_03425
- NMPDR:   fig|314225.3.peg.2398
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   TVQIMAD
- PhylomeDB:   Q2NC14
- ProtClustDB:   PRK14636
- BioCyc:   ELIT314225:ELI_03425-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 20170; Mature: 20039

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELS
CCHHHHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RKVSDVIDAAEESGEVLIEGAYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGH
HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC
RNMRGILLGIDGETVTIADNRAGEVSFALEQIHSAKLVLTDKLIAATQPLDADGAEEVLE
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCHHHHHH
DKEEKADD
HHHHCCCC
>Mature Secondary Structure 
ADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELS
CHHHHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RKVSDVIDAAEESGEVLIEGAYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGH
HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC
RNMRGILLGIDGETVTIADNRAGEVSFALEQIHSAKLVLTDKLIAATQPLDADGAEEVLE
CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCHHHHHH
DKEEKADD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA