Click here to switch to the map view.

The map label for this gene is ydaH [H]

Identifier: 85373419

GI number: 85373419

Start: 624057

End: 624857

Strand: Reverse

Name: ydaH [H]

Synonym: ELI_02960

Alternate gene names: 85373419

Gene position: 624857-624057 (Counterclockwise)

Preceding gene: 85373420

Following gene: 85373417

Centisome position: 20.47

GC content: 57.18

Gene sequence:

>801_bases
ATGGATACCAATCTGACTGCGGTGCTATGCCTCGCTTTCGTTATCAATCTTATTGGCGCACTAGCCTACGCGGCACGCAT
TGCTGGCGTACGAACCGGGCGGATCGCGATGAGCTTCGCCTTGTTCAATGTGCTGCTCCTTGTATCGAGGTTATCGAACG
GCTTCTTGGCGCCCTTGGTCGCCAAGCGCGTCGAGAACAGTCTCACCGGCCGGATTGCAACGAACCTTGAATCAGACTTC
AGGCTGATCCTCTTGTCGGCATTCATCGGCGTACTGGCGGGGCTTGTCATGGTCCCCACGGCACAACGTGTATTCGTGCG
TGCCATCGAGGCGGTGCAGCCGAGGCAATCATTGGCAAAGACACTTTTGAGAGGAGTTTCGCCGGGTGGTTTGCGCATTC
TGCGAACTTCGCTCTCCATGCCGGCTCGAGCATCTGTCGGAAAGGAAAAACCGCGAGAGCTAACGTGGGGCATCCTGGCG
GCCAATGGCGTGGCGCAAGCCTTGCTCGTGGTCGGCGTATTTGCCGCGATCTACGCGGGCTACCTCAATCCCGAATACCG
GGTGACGGCTTCGCAACTGTCGGCCGTCGTCAACGGATTTGCGACCATCTTGTTATTTCTTTTCATCGACCCGCACCTTT
CGGTTCTCACCGATGATGTTGTCGATGGCAAGCAATCGGAACCGAGCTTCCGCCGCGCAGTAGCTTGGATCTCGCTTAGT
CGCCTCGGTGGGACACTGCTCGCGCAAGCCCTTTTCTTGCCCGCTGCGATTGCAATCGTTTGGGTCGCAGACTTGATTTG
A

Upstream 100 bases:

>100_bases
AACGGTGTTGACGGCTACCAGTCTTTTCACTGTCGCCAGATCATGGATCCTTTGACCGGATTGTGACTGCCCTTTTGGAA
GACATCACTATGGGGCATTT

Downstream 100 bases:

>100_bases
TCGCACCCGTTAAACGGTGCTTGCGCGGGGGGGGTATAGCCGCGCATCGGATACCCTTTGTGGGTTCACCGAATGCTCAT
GAACCGACGACGGCATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDTNLTAVLCLAFVINLIGALAYAARIAGVRTGRIAMSFALFNVLLLVSRLSNGFLAPLVAKRVENSLTGRIATNLESDF
RLILLSAFIGVLAGLVMVPTAQRVFVRAIEAVQPRQSLAKTLLRGVSPGGLRILRTSLSMPARASVGKEKPRELTWGILA
ANGVAQALLVVGVFAAIYAGYLNPEYRVTASQLSAVVNGFATILLFLFIDPHLSVLTDDVVDGKQSEPSFRRAVAWISLS
RLGGTLLAQALFLPAAIAIVWVADLI

Sequences:

>Translated_266_residues
MDTNLTAVLCLAFVINLIGALAYAARIAGVRTGRIAMSFALFNVLLLVSRLSNGFLAPLVAKRVENSLTGRIATNLESDF
RLILLSAFIGVLAGLVMVPTAQRVFVRAIEAVQPRQSLAKTLLRGVSPGGLRILRTSLSMPARASVGKEKPRELTWGILA
ANGVAQALLVVGVFAAIYAGYLNPEYRVTASQLSAVVNGFATILLFLFIDPHLSVLTDDVVDGKQSEPSFRRAVAWISLS
RLGGTLLAQALFLPAAIAIVWVADLI
>Mature_266_residues
MDTNLTAVLCLAFVINLIGALAYAARIAGVRTGRIAMSFALFNVLLLVSRLSNGFLAPLVAKRVENSLTGRIATNLESDF
RLILLSAFIGVLAGLVMVPTAQRVFVRAIEAVQPRQSLAKTLLRGVSPGGLRILRTSLSMPARASVGKEKPRELTWGILA
ANGVAQALLVVGVFAAIYAGYLNPEYRVTASQLSAVVNGFATILLFLFIDPHLSVLTDDVVDGKQSEPSFRRAVAWISLS
RLGGTLLAQALFLPAAIAIVWVADLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021260 [H]

Pfam domain/function: PF10997 DUF2837 [H]

EC number: NA

Molecular weight: Translated: 28353; Mature: 28353

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNLTAVLCLAFVINLIGALAYAARIAGVRTGRIAMSFALFNVLLLVSRLSNGFLAPLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AKRVENSLTGRIATNLESDFRLILLSAFIGVLAGLVMVPTAQRVFVRAIEAVQPRQSLAK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHH
TLLRGVSPGGLRILRTSLSMPARASVGKEKPRELTWGILAANGVAQALLVVGVFAAIYAG
HHHHCCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLNPEYRVTASQLSAVVNGFATILLFLFIDPHLSVLTDDVVDGKQSEPSFRRAVAWISLS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLGGTLLAQALFLPAAIAIVWVADLI
HHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDTNLTAVLCLAFVINLIGALAYAARIAGVRTGRIAMSFALFNVLLLVSRLSNGFLAPLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AKRVENSLTGRIATNLESDFRLILLSAFIGVLAGLVMVPTAQRVFVRAIEAVQPRQSLAK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHH
TLLRGVSPGGLRILRTSLSMPARASVGKEKPRELTWGILAANGVAQALLVVGVFAAIYAG
HHHHCCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLNPEYRVTASQLSAVVNGFATILLFLFIDPHLSVLTDDVVDGKQSEPSFRRAVAWISLS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLGGTLLAQALFLPAAIAIVWVADLI
HHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]