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The map label for this gene is trbC [C]

Identifier: 85372999

GI number: 85372999

Start: 209503

End: 210258

Strand: Reverse

Name: trbC [C]

Synonym: ELI_00860

Alternate gene names: 85372999

Gene position: 210258-209503 (Counterclockwise)

Preceding gene: 85373000

Following gene: 85372998

Centisome position: 6.89

GC content: 68.12

Gene sequence:

>756_bases
ATGAGAAACGCCTTCCATCTCCTCGTCCTCATCAGCCTGGCAACAGCCGCTGCCTTCGCTGCCGCATCGGCGCAGGATTC
TCCGCCCGATCTCGACCTTGCCGAGATCCGCGCCCGCGCGAGCGAGCATGCCCAGGATGCCGAAGCACTCGCGACTTCGG
TCAGGACCAGGGCCGACACGCTGGCCGAGGACGCACGAACCACGCAGCAGGCGGCACTCGACAACCGCGCCGCCTATGTG
AAGGAAGCGCAGGCGAGTGCCGGCGTCGGTCCGCTCGATCTCGACGGCATGATCCGCAGCGCAGCCGACGCCGAGGTCGC
GGCGATGGGCGAAGTACCGCGCTTCATTGCCTTTGCTTCGTTGTCGATGCCCGAGCCTTCCTTGAAGGCGCTGGTCCGCG
ACGTCACCCGCGCCGGCGGGGTCACCGTGCTGCGCGGCTTCCCGCAAGGCGACAGCGCGGCCTTCAAGAAGCGGCTCGCC
GCGATCTGGCGCGATGGCAGCGAGGCCGGCGCGCTCGGGATCGATCCGCGGCTGTTCCGCACTTTCGATATCGCTGTCGC
ACCGAGCTTCGTGATGGTCGCGAGCGATTTCAGCCCCTGCGACGGGTTCGATTGCACCGACACTTTACCGCCGCACGACC
GAATCGCGGGCAATGTCAGCGTCGAGGACGCGCTCGAAACCTTTGCCGATGGCGGCGGCCCGGGCGCGCAGCTTGCCCGC
CTCCACCTCGCCCGCCTGAGGGATCAGCGCCCATGA

Upstream 100 bases:

>100_bases
TCGGTGCCTCGACCACCTTCCAGTCCCCCGGACAGGTCATCCCCGCCATCGGCGAAGACATGGGATACTTGGTCTGGCGC
AAGAGGAATTGCTGCGCGCT

Downstream 100 bases:

>100_bases
AACACCCGATTAAGCTCGCCGTGACCGCTTTTACGGCGCTCCTCCTCACCGCGAGCGCCGCAGCCCAGCAGCAGGACGCG
AAGGCCGACGGCAAGGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRNAFHLLVLISLATAAAFAAASAQDSPPDLDLAEIRARASEHAQDAEALATSVRTRADTLAEDARTTQQAALDNRAAYV
KEAQASAGVGPLDLDGMIRSAADAEVAAMGEVPRFIAFASLSMPEPSLKALVRDVTRAGGVTVLRGFPQGDSAAFKKRLA
AIWRDGSEAGALGIDPRLFRTFDIAVAPSFVMVASDFSPCDGFDCTDTLPPHDRIAGNVSVEDALETFADGGGPGAQLAR
LHLARLRDQRP

Sequences:

>Translated_251_residues
MRNAFHLLVLISLATAAAFAAASAQDSPPDLDLAEIRARASEHAQDAEALATSVRTRADTLAEDARTTQQAALDNRAAYV
KEAQASAGVGPLDLDGMIRSAADAEVAAMGEVPRFIAFASLSMPEPSLKALVRDVTRAGGVTVLRGFPQGDSAAFKKRLA
AIWRDGSEAGALGIDPRLFRTFDIAVAPSFVMVASDFSPCDGFDCTDTLPPHDRIAGNVSVEDALETFADGGGPGAQLAR
LHLARLRDQRP
>Mature_251_residues
MRNAFHLLVLISLATAAAFAAASAQDSPPDLDLAEIRARASEHAQDAEALATSVRTRADTLAEDARTTQQAALDNRAAYV
KEAQASAGVGPLDLDGMIRSAADAEVAAMGEVPRFIAFASLSMPEPSLKALVRDVTRAGGVTVLRGFPQGDSAAFKKRLA
AIWRDGSEAGALGIDPRLFRTFDIAVAPSFVMVASDFSPCDGFDCTDTLPPHDRIAGNVSVEDALETFADGGGPGAQLAR
LHLARLRDQRP

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26370; Mature: 26370

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAFHLLVLISLATAAAFAAASAQDSPPDLDLAEIRARASEHAQDAEALATSVRTRADT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEDARTTQQAALDNRAAYVKEAQASAGVGPLDLDGMIRSAADAEVAAMGEVPRFIAFAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHH
LSMPEPSLKALVRDVTRAGGVTVLRGFPQGDSAAFKKRLAAIWRDGSEAGALGIDPRLFR
CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TFDIAVAPSFVMVASDFSPCDGFDCTDTLPPHDRIAGNVSVEDALETFADGGGPGAQLAR
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
LHLARLRDQRP
HHHHHHHCCCC
>Mature Secondary Structure
MRNAFHLLVLISLATAAAFAAASAQDSPPDLDLAEIRARASEHAQDAEALATSVRTRADT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEDARTTQQAALDNRAAYVKEAQASAGVGPLDLDGMIRSAADAEVAAMGEVPRFIAFAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHH
LSMPEPSLKALVRDVTRAGGVTVLRGFPQGDSAAFKKRLAAIWRDGSEAGALGIDPRLFR
CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TFDIAVAPSFVMVASDFSPCDGFDCTDTLPPHDRIAGNVSVEDALETFADGGGPGAQLAR
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
LHLARLRDQRP
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA