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The map label for this gene is traN [H]

Identifier: 85372998

GI number: 85372998

Start: 207782

End: 209506

Strand: Reverse

Name: traN [H]

Synonym: ELI_00855

Alternate gene names: 85372998

Gene position: 209506-207782 (Counterclockwise)

Preceding gene: 85372999

Following gene: 85372997

Centisome position: 6.86

GC content: 64.81

Gene sequence:

>1725_bases
ATGAAACACCCGATTAAGCTCGCCGTGACCGCTTTTACGGCGCTCCTCCTCACCGCGAGCGCCGCAGCCCAGCAGCAGGA
CGCGAAGGCCGACGGCAAGGCCTTTGCCGAGAGCCTGCGCGGCGAGGCCCAGCAGGCGGCACAGCAACAGCCGAACACTG
CGACCCTCCCCAACTACGATCGCAACGCGGTCCGGGGGATCGAGACGCTCGCGCAGGATCCCGACCGGATCGAGGGCAAT
GCGGCGGCAGTGGCGAGCGGCCACCAGGGTTACCGCGCGATGCGCGACAGTGTGGCCAACCGCGCGCGTTTCGATCCGGG
CGAGATCGAGGACGTCATTGCGCGCAGCCTCGCGATCAACGAGAGCCCGCTCGACTACACCAGCGGCATGGCGATCGCCG
GGGGCCAGGGCTCCTGCGTCCCGCTGCCTCCCGGATCGGGCTCGGCCGGGACCTACACCGCGACCTGCAACACCGGCACT
CGGATCGACCAGTCGGCGGGCCAGTGCGCGGTGCCGCTGGCAACGACAGTGAGCCAGCTTCCGCAGTACCACTACCTGTG
CAACCGGTTCGGCGACTTCAACGGCTCCGGCGAGCCCGAGTGCGCCGGGTTCGACGGCTATTCCTGCCGCGTGACGGGAC
GGCGCGACACCTGCCTGCAGTGGAGTTCCTCGGGCGGACGTCCGTGGTGTTCCGAGCCGGGCGACCCGATCACCGAATTG
ACCTGCGACGAGCAAGTCCCGGGGCAGACACCCTACATGGTCACTACTGCGACCACGGTCACGACGACCCCCGACGAGAG
CCAGTGCTCAGGCTTTGCCGACAATGGCGACTGCACGCTCGATACCGAGATCTGCACCGATGCCGATCCGCAGACCCGAA
TCGTGAACGGCGTCTCGGTCACACGACCGTGCTGGGAATGGCAGCGCAGCTACACCTGTACCTCGCGCGAAACGGCGACC
GACTGCTCGGACATCGAAAGCCAGGGCACCTGCCGTTTCTTGCGCGAGGAATGTCTCACCGATGAGGTCCCATGCGAGAC
CTGGGAGCGCATCTACGAATGCCCACTCCCGGCAACAGACAGCACCACGCAGTATGTCTGCGACGGCGATGTCTATTGCA
TCGATGGCAGCTGCGAGACGATCGAGCGCACCGCGAACGACGAGTTCAAGGATGCCGCGGTCGCATTGCATGCAATGGAC
GAAGCGCGCGGACAGTTCGACCCGAATACGCTGACGCTGTTCCGCGGCACGCGCAACACCTGCTCGTCCAAGGTCTTCGG
CGTGCTCAATTGTTGCAAGGGCAAGGGCTTTCCGCTCATTCCGGGCATCAGCCTTCTGGTCGCGCTTGGCTGTGATCGCG
AGGAAGTGCTGCTCCACCAGCGCGATGCGCAGGGGCTGTGCGCCTATGTCGGGACCTACTGTTCGGACAAGTTCCTCGGC
GTCTGCCTGACCAAGAAGAAGGTCTATTGCTGCTTCGAGAGCAAGCTCTCGCGGATCCTGCAGGAGCAGGGCCGCAAGCA
GCTTCCCAAGCCCTGGGACAAGCCCAAGGAAGAACAGTGCGAGGGGTTCACCCTCGACGAGTTCGCCCGGCTCGATTTGA
GCCGGATGGATTTCAGCGAGGTCTATGCCGAGTTCACCGATGCCGCGCGGCTGCCCGACGAACTCGAGACCAGCATCCTC
ATCCAGCAGAAGATCGACGACTATTACGCAAGGGGCGGCCAATGA

Upstream 100 bases:

>100_bases
ATGTCAGCGTCGAGGACGCGCTCGAAACCTTTGCCGATGGCGGCGGCCCGGGCGCGCAGCTTGCCCGCCTCCACCTCGCC
CGCCTGAGGGATCAGCGCCC

Downstream 100 bases:

>100_bases
CCCATCTCTATCTCCTCACCGCGCTTGCGCTTGGCTTCGCTGCGCTCCCCGCCGCTCCGGCCCTGGCCCAGGAAAGGCAG
GAAACTGCATCGACCACCGC

Product: conjugal transfer mating pair stabilization protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MKHPIKLAVTAFTALLLTASAAAQQQDAKADGKAFAESLRGEAQQAAQQQPNTATLPNYDRNAVRGIETLAQDPDRIEGN
AAAVASGHQGYRAMRDSVANRARFDPGEIEDVIARSLAINESPLDYTSGMAIAGGQGSCVPLPPGSGSAGTYTATCNTGT
RIDQSAGQCAVPLATTVSQLPQYHYLCNRFGDFNGSGEPECAGFDGYSCRVTGRRDTCLQWSSSGGRPWCSEPGDPITEL
TCDEQVPGQTPYMVTTATTVTTTPDESQCSGFADNGDCTLDTEICTDADPQTRIVNGVSVTRPCWEWQRSYTCTSRETAT
DCSDIESQGTCRFLREECLTDEVPCETWERIYECPLPATDSTTQYVCDGDVYCIDGSCETIERTANDEFKDAAVALHAMD
EARGQFDPNTLTLFRGTRNTCSSKVFGVLNCCKGKGFPLIPGISLLVALGCDREEVLLHQRDAQGLCAYVGTYCSDKFLG
VCLTKKKVYCCFESKLSRILQEQGRKQLPKPWDKPKEEQCEGFTLDEFARLDLSRMDFSEVYAEFTDAARLPDELETSIL
IQQKIDDYYARGGQ

Sequences:

>Translated_574_residues
MKHPIKLAVTAFTALLLTASAAAQQQDAKADGKAFAESLRGEAQQAAQQQPNTATLPNYDRNAVRGIETLAQDPDRIEGN
AAAVASGHQGYRAMRDSVANRARFDPGEIEDVIARSLAINESPLDYTSGMAIAGGQGSCVPLPPGSGSAGTYTATCNTGT
RIDQSAGQCAVPLATTVSQLPQYHYLCNRFGDFNGSGEPECAGFDGYSCRVTGRRDTCLQWSSSGGRPWCSEPGDPITEL
TCDEQVPGQTPYMVTTATTVTTTPDESQCSGFADNGDCTLDTEICTDADPQTRIVNGVSVTRPCWEWQRSYTCTSRETAT
DCSDIESQGTCRFLREECLTDEVPCETWERIYECPLPATDSTTQYVCDGDVYCIDGSCETIERTANDEFKDAAVALHAMD
EARGQFDPNTLTLFRGTRNTCSSKVFGVLNCCKGKGFPLIPGISLLVALGCDREEVLLHQRDAQGLCAYVGTYCSDKFLG
VCLTKKKVYCCFESKLSRILQEQGRKQLPKPWDKPKEEQCEGFTLDEFARLDLSRMDFSEVYAEFTDAARLPDELETSIL
IQQKIDDYYARGGQ
>Mature_574_residues
MKHPIKLAVTAFTALLLTASAAAQQQDAKADGKAFAESLRGEAQQAAQQQPNTATLPNYDRNAVRGIETLAQDPDRIEGN
AAAVASGHQGYRAMRDSVANRARFDPGEIEDVIARSLAINESPLDYTSGMAIAGGQGSCVPLPPGSGSAGTYTATCNTGT
RIDQSAGQCAVPLATTVSQLPQYHYLCNRFGDFNGSGEPECAGFDGYSCRVTGRRDTCLQWSSSGGRPWCSEPGDPITEL
TCDEQVPGQTPYMVTTATTVTTTPDESQCSGFADNGDCTLDTEICTDADPQTRIVNGVSVTRPCWEWQRSYTCTSRETAT
DCSDIESQGTCRFLREECLTDEVPCETWERIYECPLPATDSTTQYVCDGDVYCIDGSCETIERTANDEFKDAAVALHAMD
EARGQFDPNTLTLFRGTRNTCSSKVFGVLNCCKGKGFPLIPGISLLVALGCDREEVLLHQRDAQGLCAYVGTYCSDKFLG
VCLTKKKVYCCFESKLSRILQEQGRKQLPKPWDKPKEEQCEGFTLDEFARLDLSRMDFSEVYAEFTDAARLPDELETSIL
IQQKIDDYYARGGQ

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 62574; Mature: 62574

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPIKLAVTAFTALLLTASAAAQQQDAKADGKAFAESLRGEAQQAAQQQPNTATLPNYD
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RNAVRGIETLAQDPDRIEGNAAAVASGHQGYRAMRDSVANRARFDPGEIEDVIARSLAIN
HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
ESPLDYTSGMAIAGGQGSCVPLPPGSGSAGTYTATCNTGTRIDQSAGQCAVPLATTVSQL
CCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEECHHHHHHHHC
PQYHYLCNRFGDFNGSGEPECAGFDGYSCRVTGRRDTCLQWSSSGGRPWCSEPGDPITEL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCC
TCDEQVPGQTPYMVTTATTVTTTPDESQCSGFADNGDCTLDTEICTDADPQTRIVNGVSV
CCCCCCCCCCCEEEEEEEEEEECCCHHHHCCCCCCCCEEECCHHCCCCCCCCEEECCCCC
TRPCWEWQRSYTCTSRETATDCSDIESQGTCRFLREECLTDEVPCETWERIYECPLPATD
CCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
STTQYVCDGDVYCIDGSCETIERTANDEFKDAAVALHAMDEARGQFDPNTLTLFRGTRNT
CCCEEEECCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
CSSKVFGVLNCCKGKGFPLIPGISLLVALGCDREEVLLHQRDAQGLCAYVGTYCSDKFLG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHE
VCLTKKKVYCCFESKLSRILQEQGRKQLPKPWDKPKEEQCEGFTLDEFARLDLSRMDFSE
EEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCHHH
VYAEFTDAARLPDELETSILIQQKIDDYYARGGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHPIKLAVTAFTALLLTASAAAQQQDAKADGKAFAESLRGEAQQAAQQQPNTATLPNYD
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RNAVRGIETLAQDPDRIEGNAAAVASGHQGYRAMRDSVANRARFDPGEIEDVIARSLAIN
HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
ESPLDYTSGMAIAGGQGSCVPLPPGSGSAGTYTATCNTGTRIDQSAGQCAVPLATTVSQL
CCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEECHHHHHHHHC
PQYHYLCNRFGDFNGSGEPECAGFDGYSCRVTGRRDTCLQWSSSGGRPWCSEPGDPITEL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCC
TCDEQVPGQTPYMVTTATTVTTTPDESQCSGFADNGDCTLDTEICTDADPQTRIVNGVSV
CCCCCCCCCCCEEEEEEEEEEECCCHHHHCCCCCCCCEEECCHHCCCCCCCCEEECCCCC
TRPCWEWQRSYTCTSRETATDCSDIESQGTCRFLREECLTDEVPCETWERIYECPLPATD
CCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
STTQYVCDGDVYCIDGSCETIERTANDEFKDAAVALHAMDEARGQFDPNTLTLFRGTRNT
CCCEEEECCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
CSSKVFGVLNCCKGKGFPLIPGISLLVALGCDREEVLLHQRDAQGLCAYVGTYCSDKFLG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHE
VCLTKKKVYCCFESKLSRILQEQGRKQLPKPWDKPKEEQCEGFTLDEFARLDLSRMDFSE
EEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCHHH
VYAEFTDAARLPDELETSILIQQKIDDYYARGGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]