Click here to switch to the map view.

The map label for this gene is wzzE [H]

Identifier: 85060362

GI number: 85060362

Start: 4088895

End: 4089947

Strand: Reverse

Name: wzzE [H]

Synonym: SG2384

Alternate gene names: 85060362

Gene position: 4089947-4088895 (Counterclockwise)

Preceding gene: 85060363

Following gene: 85060361

Centisome position: 98.05

GC content: 59.07

Gene sequence:

>1053_bases
ATGACACCTGCAAGCTCACCATCTTCCGCCGGCCGGGAACAGGCTATCGACAATGAACTGGACTTGCGCGGCCTGCTGTG
TTCCCTGTGGCGCGGCAAACTCACCGTTATCGCCTGTGCTGTCGTGTTTGCACTGGGCGCATTGATTTACTCCCTGGTGG
TGCGCCAGGAGTGGACCGCCATCGCCATTACCGACAAACCTACGGTGAATGTGCTGGGCAGCTACTTCTCCCAGCAGCAG
TTTCTGCGCAACCTGGATGTGAAAAATACCGCGCTGCCGACCACCGACACCCTTTCGATTGCCGACGAGGCCTATCAGGA
GTTTTTGCGCCAGCTCGCTTCCTATGATACCCGGCGGGATTTCTGGTTCGCCAGCCCCTATTACCAGTCGCGCAAAAAGG
GCGACGTTCATGCCGACGCGGTGCTGCTGGATGAATTAATAAACGCCATTCAGTTCTTGCCGCACGACGACGTGAAAAAG
CTGCCGGACAGCGCGCGGCTGGTGGTGGAAACCGCGCCGGACGCCAATCAACTGTTGCGGCGCTATGTGGATTTCGCCAA
CCAGCGTGCGGCCAACCACCTCAATGAGGACGTTGTGGCCGCCTGGGCTGCGCGCACCGTCTCGCTCAAGGCGCAGGTAA
AACGGCAGGAGGCAGTGGCTGCGGCGGTTTACCATCGCGAGCAGCTACAGCTTAATCAGGCGCTGAAACTGGCGCACGCG
CAGGGCATCGATCGCAGCCGAACCAATGTCGTCGCCGACAGTTTGCCTCAATCCGAAATGTTCCTGCTGGGCCATCCGCT
GTTACAGGCACGTTTGGACGCTCTGCAGGCGGCCGGACCGGCCTATGATACCGATTACGACCAAAACCGCGCGATGTTGA
CTACCCTCAATGTAGGGCCGGTATTGAACAAGAGCTTCAAGACCTACCGTTATTTAAGGACCCCTGAAGAGCCGGTAAAA
CGCGATAAGCCACGCCGCCTGTTCCTGCTTATTCTGTGGGGCGCTGTGGGTACGTTGATCGGTGCGGGAGTCGCGCTGGC
GCGCCGTCGTTAA

Upstream 100 bases:

>100_bases
TGAAATGCGCCTGGCGGGTTGCCCGCTTCGTCAAGCGGACCAAGCGACGGCTCAGCCAATATAAAAAAAGCACCACCTTA
AACGGAAATTCAGGGCGAAA

Downstream 100 bases:

>100_bases
TGCCGCCGACAGGCATTAAACTGTCGGAATAGACCGCTGCCATTAGCCGCGCGGCCCACCGAATTCTAAGCCGTAGCCGG
CTTTGCTCAGAATGAAGGGA

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTPASSPSSAGREQAIDNELDLRGLLCSLWRGKLTVIACAVVFALGALIYSLVVRQEWTAIAITDKPTVNVLGSYFSQQQ
FLRNLDVKNTALPTTDTLSIADEAYQEFLRQLASYDTRRDFWFASPYYQSRKKGDVHADAVLLDELINAIQFLPHDDVKK
LPDSARLVVETAPDANQLLRRYVDFANQRAANHLNEDVVAAWAARTVSLKAQVKRQEAVAAAVYHREQLQLNQALKLAHA
QGIDRSRTNVVADSLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGPVLNKSFKTYRYLRTPEEPVK
RDKPRRLFLLILWGAVGTLIGAGVALARRR

Sequences:

>Translated_350_residues
MTPASSPSSAGREQAIDNELDLRGLLCSLWRGKLTVIACAVVFALGALIYSLVVRQEWTAIAITDKPTVNVLGSYFSQQQ
FLRNLDVKNTALPTTDTLSIADEAYQEFLRQLASYDTRRDFWFASPYYQSRKKGDVHADAVLLDELINAIQFLPHDDVKK
LPDSARLVVETAPDANQLLRRYVDFANQRAANHLNEDVVAAWAARTVSLKAQVKRQEAVAAAVYHREQLQLNQALKLAHA
QGIDRSRTNVVADSLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGPVLNKSFKTYRYLRTPEEPVK
RDKPRRLFLLILWGAVGTLIGAGVALARRR
>Mature_349_residues
TPASSPSSAGREQAIDNELDLRGLLCSLWRGKLTVIACAVVFALGALIYSLVVRQEWTAIAITDKPTVNVLGSYFSQQQF
LRNLDVKNTALPTTDTLSIADEAYQEFLRQLASYDTRRDFWFASPYYQSRKKGDVHADAVLLDELINAIQFLPHDDVKKL
PDSARLVVETAPDANQLLRRYVDFANQRAANHLNEDVVAAWAARTVSLKAQVKRQEAVAAAVYHREQLQLNQALKLAHAQ
GIDRSRTNVVADSLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGPVLNKSFKTYRYLRTPEEPVKR
DKPRRLFLLILWGAVGTLIGAGVALARRR

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=333, Percent_Identity=62.7627627627628, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1786802, Length=373, Percent_Identity=26.0053619302949, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87082029, Length=332, Percent_Identity=25.3012048192771, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39099; Mature: 38968

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPASSPSSAGREQAIDNELDLRGLLCSLWRGKLTVIACAVVFALGALIYSLVVRQEWTA
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IAITDKPTVNVLGSYFSQQQFLRNLDVKNTALPTTDTLSIADEAYQEFLRQLASYDTRRD
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FWFASPYYQSRKKGDVHADAVLLDELINAIQFLPHDDVKKLPDSARLVVETAPDANQLLR
EEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHHHHH
RYVDFANQRAANHLNEDVVAAWAARTVSLKAQVKRQEAVAAAVYHREQLQLNQALKLAHA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIDRSRTNVVADSLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGP
CCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCH
VLNKSFKTYRYLRTPEEPVKRDKPRRLFLLILWGAVGTLIGAGVALARRR
HHHHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPASSPSSAGREQAIDNELDLRGLLCSLWRGKLTVIACAVVFALGALIYSLVVRQEWTA
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IAITDKPTVNVLGSYFSQQQFLRNLDVKNTALPTTDTLSIADEAYQEFLRQLASYDTRRD
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FWFASPYYQSRKKGDVHADAVLLDELINAIQFLPHDDVKKLPDSARLVVETAPDANQLLR
EEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHHHHH
RYVDFANQRAANHLNEDVVAAWAARTVSLKAQVKRQEAVAAAVYHREQLQLNQALKLAHA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIDRSRTNVVADSLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGP
CCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCH
VLNKSFKTYRYLRTPEEPVKRDKPRRLFLLILWGAVGTLIGAGVALARRR
HHHHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]