| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is rmlA2 [H]
Identifier: 85060358
GI number: 85060358
Start: 4084431
End: 4085312
Strand: Reverse
Name: rmlA2 [H]
Synonym: SG2380
Alternate gene names: 85060358
Gene position: 4085312-4084431 (Counterclockwise)
Preceding gene: 85060359
Following gene: 85060357
Centisome position: 97.94
GC content: 58.5
Gene sequence:
>882_bases ATGAAAGGTATTGTCTTGGCGGGCGGCAGCGGCAGTCGCCTCTATCCGATTACCCGCGGTATTTCCAAACAGCTGTTGCC CGTGTACGACAAGCCGATGATTTATTATCCGCTATCTGTACTGATGCTGGCGGGGATCCGCGACATTCTGATTATCACCA CACCAGAAGAGATGCCATTATTCAAGCGGTTGCTCGGCGCGGGCGAGGCGTTTGGCGTTCGTCTGACTTATGCCGCCCAG CCGAGTCCCGACGGCATAGCGCAGGCGTTCCTGATTGGCGAAAGCTTTATCGGCGGTGACCGTTGCTGCCTGGTGCTCGG CGATAATATCTATTTCGGTCAGGGGTTCAGTCCCAAGCTGCGGCAGGTGGCGTCACGCGAGCAGGGCGCGACGCTATTCG CCTATCAGGTGATGGATCCTGAGCGTTTCGGCGTGGTGGCGTTCGACGACGATTTTCGCGCCGTCGCGCTTGAGGAAAAA CCGGCCCATCCACGCTCACGCTGGGCGGTGACCGGGCTTTATTTCTATGATCGTCAGGTGGTGGATTTCGCCAGGCGGGT CACGCCTTCGGCGCGCGGAGAACTGGAGATTACGTCGATAAACCAGATGTATCTGGAGCAGCGCGGGCTGCACGTCGAGC TGCTGGGGCGGGGTTTTGCCTGGCTGGATACCGGCACTCATGACAGCCTGATTGAAGCCAGTACCTTTGTGCAGACCGTT GAGAAGCGCCAGGGGTTTAAAATCGCCTGTCTGGAGGAAATCGGTTGGCGCAACGGTTGGCTCGATGATGACGGCGCGCG GCGCGCGGCGCAGGCACTGGCGAAAACCGGTTATGGACAATATCTGTTGGATCTGCTCAATGTCCGTCCACGCCAATACT GA
Upstream 100 bases:
>100_bases GGTATTTGACCCATCGTGAGTGGTGGCAGCGCGTTCTGGACGGCAGCTATCGCGGCGAACGTCTCGGTCTCGGGCCAGGC TTGTAAGGCGAGGAGTGCAG
Downstream 100 bases:
>100_bases TCTCCTGACCTGGGAGAGCGACTTTTTTGGCCGCCGTCTGGGCCGTGTCGCATTTGATGATGCCGCGCCCTGTCTGACGT CCGGGGGACTTACGGCGTTT
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 2; dTDP-glucose pyrophosphorylase 2; dTDP-glucose synthase 2 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPLFKRLLGAGEAFGVRLTYAAQ PSPDGIAQAFLIGESFIGGDRCCLVLGDNIYFGQGFSPKLRQVASREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEK PAHPRSRWAVTGLYFYDRQVVDFARRVTPSARGELEITSINQMYLEQRGLHVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLLDLLNVRPRQY
Sequences:
>Translated_293_residues MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPLFKRLLGAGEAFGVRLTYAAQ PSPDGIAQAFLIGESFIGGDRCCLVLGDNIYFGQGFSPKLRQVASREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEK PAHPRSRWAVTGLYFYDRQVVDFARRVTPSARGELEITSINQMYLEQRGLHVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLLDLLNVRPRQY >Mature_293_residues MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPLFKRLLGAGEAFGVRLTYAAQ PSPDGIAQAFLIGESFIGGDRCCLVLGDNIYFGQGFSPKLRQVASREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEK PAHPRSRWAVTGLYFYDRQVVDFARRVTPSARGELEITSINQMYLEQRGLHVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLLDLLNVRPRQY
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790224, Length=293, Percent_Identity=78.839590443686, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1788351, Length=285, Percent_Identity=63.1578947368421, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI133931050, Length=229, Percent_Identity=24.4541484716157, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320148, Length=258, Percent_Identity=25.1937984496124, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI21355443, Length=251, Percent_Identity=22.7091633466135, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24644084, Length=251, Percent_Identity=22.7091633466135, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 32711; Mature: 32711
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPL CCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCHH FKRLLGAGEAFGVRLTYAAQPSPDGIAQAFLIGESFIGGDRCCLVLGDNIYFGQGFSPKL HHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHH RQVASREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEKPAHPRSRWAVTGLYFYDRQV HHHHHHCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEHHHHH VDFARRVTPSARGELEITSINQMYLEQRGLHVELLGRGFAWLDTGTHDSLIEASTFVQTV HHHHHHCCCCCCCEEEEEEHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHH EKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLLDLLNVRPRQY HHHCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPL CCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCHH FKRLLGAGEAFGVRLTYAAQPSPDGIAQAFLIGESFIGGDRCCLVLGDNIYFGQGFSPKL HHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHH RQVASREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEKPAHPRSRWAVTGLYFYDRQV HHHHHHCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEHHHHH VDFARRVTPSARGELEITSINQMYLEQRGLHVELLGRGFAWLDTGTHDSLIEASTFVQTV HHHHHHCCCCCCCEEEEEEHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHH EKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLLDLLNVRPRQY HHHCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 7559340 [H]