| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060342
Identifier: 85060342
GI number: 85060342
Start: 4058158
End: 4058760
Strand: Reverse
Name: 85060342
Synonym: SG2364
Alternate gene names: NA
Gene position: 4058760-4058158 (Counterclockwise)
Preceding gene: 85060343
Following gene: 85060341
Centisome position: 97.31
GC content: 48.59
Gene sequence:
>603_bases ATGTCTAACTTCGTCGCTATCCAGAACACCGCCATGCCTGTAGTCGAGTACCAAGGTAAGCGCGTGGTCACCTTCGCCAT GATTGATAAGGTGCATGGTCGTCCGAAGGGAACGGCATGTGCAGCCTTTAACCGTAACCGTCGTCGGTTTGTTGAAGGTC GAGATTTCTTTAATGTAACCTCATACGTTAAACGTATGAGGTCGTTGGAGGGGGTATTCCCCGCTCGTTCCTCGAAAGGG ATCCTCATCACAGAGTTCGGCTATTTGATACTGATCAAGTCATTTAACGATGATCTATCCTGGGATGTACAAAACCAGAT GGTCGAAAGCTACTTCCGCCGCAACACCCTGGGCGAACTCCGTCACGTCGAGATACCCAGTCTTGAAGAATTAAGCCAAA TGCCAGCGGAGAAAGCCCAGCATATTGTTGCCAAGGCCGAGAAAGAATTCTCCTTCGGTCACGGTAAGCCCGGAAGTGCC GCCATGACATTACGCCGCAAGGAATTAAAGCAGATACGTCCGGCTATCAGGACATTCATTGATTTGCACCAGATTTCCAT TTGCGACTTAGGCGATTTTGTCAAAGTGAAAAATAACACCTAA
Upstream 100 bases:
>100_bases ATGAAGGCATAGAGGAAATCTCTATTCCCCAAGGTATGGTCAACATCTCCACCTTCAACCCCAGCCATAACGAACATCGT TACAGTTCAGGGGGTGGCTC
Downstream 100 bases:
>100_bases CTGTTTGTACCGATGGATAGGAGTGGTTCTATCGTTACTAACATCTAGGGCCTATAAAGACAGGAGGGTTATTCTAACCG GGTGGCGGAATTATCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSNFVAIQNTAMPVVEYQGKRVVTFAMIDKVHGRPKGTACAAFNRNRRRFVEGRDFFNVTSYVKRMRSLEGVFPARSSKG ILITEFGYLILIKSFNDDLSWDVQNQMVESYFRRNTLGELRHVEIPSLEELSQMPAEKAQHIVAKAEKEFSFGHGKPGSA AMTLRRKELKQIRPAIRTFIDLHQISICDLGDFVKVKNNT
Sequences:
>Translated_200_residues MSNFVAIQNTAMPVVEYQGKRVVTFAMIDKVHGRPKGTACAAFNRNRRRFVEGRDFFNVTSYVKRMRSLEGVFPARSSKG ILITEFGYLILIKSFNDDLSWDVQNQMVESYFRRNTLGELRHVEIPSLEELSQMPAEKAQHIVAKAEKEFSFGHGKPGSA AMTLRRKELKQIRPAIRTFIDLHQISICDLGDFVKVKNNT >Mature_199_residues SNFVAIQNTAMPVVEYQGKRVVTFAMIDKVHGRPKGTACAAFNRNRRRFVEGRDFFNVTSYVKRMRSLEGVFPARSSKGI LITEFGYLILIKSFNDDLSWDVQNQMVESYFRRNTLGELRHVEIPSLEELSQMPAEKAQHIVAKAEKEFSFGHGKPGSAA MTLRRKELKQIRPAIRTFIDLHQISICDLGDFVKVKNNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22873; Mature: 22742
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFVAIQNTAMPVVEYQGKRVVTFAMIDKVHGRPKGTACAAFNRNRRRFVEGRDFFNVT CCCEEEECCCCCCCEEECCCEEEEHEEHHHHCCCCCCCEEECCCCCCHHHHCCCCHHHHH SYVKRMRSLEGVFPARSSKGILITEFGYLILIKSFNDDLSWDVQNQMVESYFRRNTLGEL HHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHH RHVEIPSLEELSQMPAEKAQHIVAKAEKEFSFGHGKPGSAAMTLRRKELKQIRPAIRTFI HCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLHQISICDLGDFVKVKNNT HHHHHEEECCCCEEEECCCC >Mature Secondary Structure SNFVAIQNTAMPVVEYQGKRVVTFAMIDKVHGRPKGTACAAFNRNRRRFVEGRDFFNVT CCEEEECCCCCCCEEECCCEEEEHEEHHHHCCCCCCCEEECCCCCCHHHHCCCCHHHHH SYVKRMRSLEGVFPARSSKGILITEFGYLILIKSFNDDLSWDVQNQMVESYFRRNTLGEL HHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHH RHVEIPSLEELSQMPAEKAQHIVAKAEKEFSFGHGKPGSAAMTLRRKELKQIRPAIRTFI HCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLHQISICDLGDFVKVKNNT HHHHHEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA