| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yigB [H]
Identifier: 85060321
GI number: 85060321
Start: 4021898
End: 4022608
Strand: Reverse
Name: yigB [H]
Synonym: SG2343
Alternate gene names: 85060321
Gene position: 4022608-4021898 (Counterclockwise)
Preceding gene: 85060322
Following gene: 85060320
Centisome position: 96.44
GC content: 61.46
Gene sequence:
>711_bases ATGCATTTCTATCGTCCTTTGCGACCGCTGCGCGCGTTAACCTTTGATCTCGATGATACCCTGTACGATAACCGGCCGGT GATTGCCCGCACCGAATATGAGTCGGTGCGGTTTCTACAGCATTACCATCCTGCGCTGCGCGACCTGAGGCAAGAAGATT ATCAGCGTTTGCGCCGTGAGCTGCGTCAGCGCGAGCCGGAAATCTATCACGATGTGAGCCATTGGCGCTGGCGCTCGATC GAATTGGCGATGCGTAACGCGGGGCTCAGCGAGCACGACGCGCGCGCCGGCGCCGATGTTGCCATGGAGGTCGTCTTGCT CTGGCGAAGTCAGATTGATGTCCCGGCAGACACGCACGAAACGTTGGCGGCCCTTGGCGCCCGCTGGCCGTTGGTGGCGA TCACCAACGGCAACGCGTCTCCCGAGGCCTGCGGGCTGGCGGGCTATTTCAGCCACATTCTGCGCGCCGGCCCGGACGGC CGCGCCAAGCCCTGGCAGGATATGTACCATCTGGTGGCGACGCTGCTGAATGTGCCGCCCGAGACTATTTTGCACGTGGG CGACGATCTGGAAGCGGATGTCACCGGCGCCATTCGCTACGGGATGCAGGCCTGCTGGATCAACGATCGCGGCGGTAATT TCGCCGCCGATGCGCGTCTGTTGCCGCATCTGGAAATTTCGCGGTTGGCATCCCTGACAGCCTTGTTATAA
Upstream 100 bases:
>100_bases CCAACCTCAGTACCACCCAGATTTACACTCACCTCGATTTTCAGCATTTGGCATCGGTGTATGATGCCGCGCACCCACGA GCCAAACGGGAAAAAACCTG
Downstream 100 bases:
>100_bases TCAACGCTAACTCTGTATAAATGACCAGTGTTTCGCCGCCGCCGGGCGGCGTTCCTCATCGCATGTTAAAGGCCACCTAT GGACGTTTCTGATTTGCTCA
Product: flavin mononucleotide phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MHFYRPLRPLRALTFDLDDTLYDNRPVIARTEYESVRFLQHYHPALRDLRQEDYQRLRRELRQREPEIYHDVSHWRWRSI ELAMRNAGLSEHDARAGADVAMEVVLLWRSQIDVPADTHETLAALGARWPLVAITNGNASPEACGLAGYFSHILRAGPDG RAKPWQDMYHLVATLLNVPPETILHVGDDLEADVTGAIRYGMQACWINDRGGNFAADARLLPHLEISRLASLTALL
Sequences:
>Translated_236_residues MHFYRPLRPLRALTFDLDDTLYDNRPVIARTEYESVRFLQHYHPALRDLRQEDYQRLRRELRQREPEIYHDVSHWRWRSI ELAMRNAGLSEHDARAGADVAMEVVLLWRSQIDVPADTHETLAALGARWPLVAITNGNASPEACGLAGYFSHILRAGPDG RAKPWQDMYHLVATLLNVPPETILHVGDDLEADVTGAIRYGMQACWINDRGGNFAADARLLPHLEISRLASLTALL >Mature_236_residues MHFYRPLRPLRALTFDLDDTLYDNRPVIARTEYESVRFLQHYHPALRDLRQEDYQRLRRELRQREPEIYHDVSHWRWRSI ELAMRNAGLSEHDARAGADVAMEVVLLWRSQIDVPADTHETLAALGARWPLVAITNGNASPEACGLAGYFSHILRAGPDG RAKPWQDMYHLVATLLNVPPETILHVGDDLEADVTGAIRYGMQACWINDRGGNFAADARLLPHLEISRLASLTALL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjjG [H]
Homologues:
Organism=Homo sapiens, GI23308749, Length=245, Percent_Identity=28.1632653061224, Blast_Score=83, Evalue=3e-16, Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=64.7058823529412, Blast_Score=307, Evalue=4e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 26937; Mature: 26937
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFYRPLRPLRALTFDLDDTLYDNRPVIARTEYESVRFLQHYHPALRDLRQEDYQRLRRE CCCCCHHHHHHHHHCCCCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQREPEIYHDVSHWRWRSIELAMRNAGLSEHDARAGADVAMEVVLLWRSQIDVPADTHE HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH TLAALGARWPLVAITNGNASPEACGLAGYFSHILRAGPDGRAKPWQDMYHLVATLLNVPP HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH ETILHVGDDLEADVTGAIRYGMQACWINDRGGNFAADARLLPHLEISRLASLTALL HHHEECCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MHFYRPLRPLRALTFDLDDTLYDNRPVIARTEYESVRFLQHYHPALRDLRQEDYQRLRRE CCCCCHHHHHHHHHCCCCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQREPEIYHDVSHWRWRSIELAMRNAGLSEHDARAGADVAMEVVLLWRSQIDVPADTHE HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH TLAALGARWPLVAITNGNASPEACGLAGYFSHILRAGPDGRAKPWQDMYHLVATLLNVPP HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH ETILHVGDDLEADVTGAIRYGMQACWINDRGGNFAADARLLPHLEISRLASLTALL HHHEECCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]