| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060193
Identifier: 85060193
GI number: 85060193
Start: 3847192
End: 3847692
Strand: Reverse
Name: 85060193
Synonym: SG2215
Alternate gene names: NA
Gene position: 3847692-3847192 (Counterclockwise)
Preceding gene: 85060196
Following gene: 85060191
Centisome position: 92.25
GC content: 62.08
Gene sequence:
>501_bases ATGGCCAGGCCATTGCACACGGCGATGATGGCCAGCAGCCATAAAAACAGCACGCGCCTATCGACCCATGGTGTGCAACA ACATGCATGCGCGGCGAGATTTCGCCAGAAAGGGCCTGGGGCTTGCCTGGTTGCCCGATTATTACGTGCAGGAGGATCTT CGGCGGGGGGCGTTGGTGTGCCTGCTGAACTTTGCGAGCCACTGTGGGAGCTTTGGCCCGCCGGGCCTTTTATGCCGCTG AAAAGCAGCGTGTTTATCGATTTCCTTGGAGAAGCGCTGGGGGAGGCGGCGGTCGCGCATCAAGCGGCGACGAAGACGGG AAGCGATGCAACGTCCCGGCTGGTAAACGGCGAAATGACGTTTGATCGCGACGCGGCCGCCAAAGCGATTGAAGAGCGCA TTGCCCGACCGCAGGGCCTGACGGTGGAAGACGCCGCAAGCGGCGTCACCACCTTACGCAGGCACGCTGGCGGTGAGGGA GGGGATCCTGGGGACATCTGA
Upstream 100 bases:
>100_bases AGCCCGAGGGAGGGTTCCATCTCACCCACGACTTCCCGATGATCAGTCGGGGAGCATAATACCCTGAGTACAATGATCGA GATATAAGTGGAGGGTTACG
Downstream 100 bases:
>100_bases GTTAATCATCAGAAGGTGTGAACTTAAATGCATTTATTTGAATCAAATGCAGATATCTGATTTTAAATGAGAACACGTTT AACTGCACGTTAAGCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MARPLHTAMMASSHKNSTRLSTHGVQQHACAARFRQKGPGACLVARLLRAGGSSAGGVGVPAELCEPLWELWPAGPFMPL KSSVFIDFLGEALGEAAVAHQAATKTGSDATSRLVNGEMTFDRDAAAKAIEERIARPQGLTVEDAASGVTTLRRHAGGEG GDPGDI
Sequences:
>Translated_166_residues MARPLHTAMMASSHKNSTRLSTHGVQQHACAARFRQKGPGACLVARLLRAGGSSAGGVGVPAELCEPLWELWPAGPFMPL KSSVFIDFLGEALGEAAVAHQAATKTGSDATSRLVNGEMTFDRDAAAKAIEERIARPQGLTVEDAASGVTTLRRHAGGEG GDPGDI >Mature_165_residues ARPLHTAMMASSHKNSTRLSTHGVQQHACAARFRQKGPGACLVARLLRAGGSSAGGVGVPAELCEPLWELWPAGPFMPLK SSVFIDFLGEALGEAAVAHQAATKTGSDATSRLVNGEMTFDRDAAAKAIEERIARPQGLTVEDAASGVTTLRRHAGGEGG DPGDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17228; Mature: 17096
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLHTAMMASSHKNSTRLSTHGVQQHACAARFRQKGPGACLVARLLRAGGSSAGGVGV CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC PAELCEPLWELWPAGPFMPLKSSVFIDFLGEALGEAAVAHQAATKTGSDATSRLVNGEMT CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC FDRDAAAKAIEERIARPQGLTVEDAASGVTTLRRHAGGEGGDPGDI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ARPLHTAMMASSHKNSTRLSTHGVQQHACAARFRQKGPGACLVARLLRAGGSSAGGVGV CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC PAELCEPLWELWPAGPFMPLKSSVFIDFLGEALGEAAVAHQAATKTGSDATSRLVNGEMT CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC FDRDAAAKAIEERIARPQGLTVEDAASGVTTLRRHAGGEGGDPGDI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA