| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is murI
Identifier: 85060131
GI number: 85060131
Start: 3752666
End: 3753538
Strand: Reverse
Name: murI
Synonym: SG2153
Alternate gene names: 85060131
Gene position: 3753538-3752666 (Counterclockwise)
Preceding gene: 85060133
Following gene: 85060130
Centisome position: 89.99
GC content: 57.16
Gene sequence:
>873_bases ATGGCTACCAGACTGCAGGATGGGAATTCTATCTCACCGGAACCTATGCTTTCTGACGGCAGCGCCGCCAAACGGCCCAC CATTCTTGTCTTTGACTCTGGCGTGGGGGGCCTATCAATATATAATGAAGTCAGGCAAACGTTGCCCAATGCCCATTATT TGTACGTTTTTGACAATGAGGCCTTCCCGTATGGGGAAAAACCGGAGCAATTCATTGTCGATAGGGTCGTCGCCATTGTT GGTGCGATGTGGCGACAGCATAAGATCGACTTGGTCATCGTTGCCTGCAATACCGCCAGCACTATTTCACTGCCGGCGCT GCGCGAGCGTTTCCCCTGTCCGATTATCGGCGTGGTACCGGCGATCAAACCGGCGGCCCGACTCACCCGCAATGGTATCG TCGGGTTGCTGGCGACGCGCGCTACAGTACAACGCAGTTACACCCATGATCTCATCAGTCAATACGCCGGCGATTGCCAA ATTTTGCAGTTAGGGACGGCCGAACTGGTGGATATGGCGGAAGCCAGATTGCATGGCGAATTGGTGCCCCTGCCGGTGTT GCGCAAACTTCTGCGCCCCTGGCTAAGGGCAGCGGAGCCGCCTGACACGGTCGTACTGGGCTGTACCCACTTCCCCTTGC TGAGCCAGGAACTCCAGGCGGTACTACCGGAAGGAACCCGTCTGGTCGATTCCGGGTCGGCCATTGCCCGCCGCGCGGCT TGGCTGGTGGAGCATGACATGGACGTCAGCAGTCTGCAGGGCGAAACAGGACCGAATAAAACTTATTGCCTCGTTACCAC GCCACAGGCGGTAGCGCTGATGCCGGCACTGACGCGCTATGGTTTCGGCTCATCGGGAATGCTTACGCTTTAA
Upstream 100 bases:
>100_bases ATCAGTCTGTGGGATATTGCGGCGTCATATCCGCTGACAACCCGGTTGACGGTTCGTGGTAGACTGGCCAATGTGTTCGA TAAAAATTATGAGACAGCTT
Downstream 100 bases:
>100_bases CAGCACCCGATGCGGCCTCTCGGCGCGCGTTATTGCCCGTCCTTTCGCGAGTCGGATGTCAGCCGCCCCAGGGATAGCAC AAGTGGCGGAAAGATTATGG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MATRLQDGNSISPEPMLSDGSAAKRPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIV GAMWRQHKIDLVIVACNTASTISLPALRERFPCPIIGVVPAIKPAARLTRNGIVGLLATRATVQRSYTHDLISQYAGDCQ ILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWLRAAEPPDTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAA WLVEHDMDVSSLQGETGPNKTYCLVTTPQAVALMPALTRYGFGSSGMLTL
Sequences:
>Translated_290_residues MATRLQDGNSISPEPMLSDGSAAKRPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIV GAMWRQHKIDLVIVACNTASTISLPALRERFPCPIIGVVPAIKPAARLTRNGIVGLLATRATVQRSYTHDLISQYAGDCQ ILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWLRAAEPPDTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAA WLVEHDMDVSSLQGETGPNKTYCLVTTPQAVALMPALTRYGFGSSGMLTL >Mature_289_residues ATRLQDGNSISPEPMLSDGSAAKRPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVG AMWRQHKIDLVIVACNTASTISLPALRERFPCPIIGVVPAIKPAARLTRNGIVGLLATRATVQRSYTHDLISQYAGDCQI LQLGTAELVDMAEARLHGELVPLPVLRKLLRPWLRAAEPPDTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAW LVEHDMDVSSLQGETGPNKTYCLVTTPQAVALMPALTRYGFGSSGMLTL
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=283, Percent_Identity=64.3109540636042, Blast_Score=361, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_SODGM (Q2NQZ7)
Other databases:
- EMBL: AP008232 - RefSeq: YP_455833.1 - ProteinModelPortal: Q2NQZ7 - SMR: Q2NQZ7 - STRING: Q2NQZ7 - GeneID: 3868262 - GenomeReviews: AP008232_GR - KEGG: sgl:SG2153 - NMPDR: fig|343509.6.peg.4751 - eggNOG: COG0796 - HOGENOM: HBG645102 - OMA: ARTNAMI - PhylomeDB: Q2NQZ7 - ProtClustDB: PRK00865 - BioCyc: SGLO343509:SG2153-MONOMER - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 31496; Mature: 31365
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRLQDGNSISPEPMLSDGSAAKRPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCC AFPYGEKPEQFIVDRVVAIVGAMWRQHKIDLVIVACNTASTISLPALRERFPCPIIGVVP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHHHHCCCCEEECCC AIKPAARLTRNGIVGLLATRATVQRSYTHDLISQYAGDCQILQLGTAELVDMAEARLHGE CCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCC LVPLPVLRKLLRPWLRAAEPPDTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAA CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHH WLVEHDMDVSSLQGETGPNKTYCLVTTPQAVALMPALTRYGFGSSGMLTL HHHHCCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEC >Mature Secondary Structure ATRLQDGNSISPEPMLSDGSAAKRPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCC AFPYGEKPEQFIVDRVVAIVGAMWRQHKIDLVIVACNTASTISLPALRERFPCPIIGVVP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHHHHCCCCEEECCC AIKPAARLTRNGIVGLLATRATVQRSYTHDLISQYAGDCQILQLGTAELVDMAEARLHGE CCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCC LVPLPVLRKLLRPWLRAAEPPDTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAA CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHH WLVEHDMDVSSLQGETGPNKTYCLVTTPQAVALMPALTRYGFGSSGMLTL HHHHCCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA