| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is cheZ [H]
Identifier: 85060042
GI number: 85060042
Start: 3562660
End: 3563340
Strand: Reverse
Name: cheZ [H]
Synonym: SG2064
Alternate gene names: 85060042
Gene position: 3563340-3562660 (Counterclockwise)
Preceding gene: 85060043
Following gene: 85060041
Centisome position: 85.43
GC content: 61.38
Gene sequence:
>681_bases ATGGCGCGGCGGGCCTGCGGCGATGCGCCAGGCGGGCGCCTGGACGCTGGTCAAGCTGAAGGCGGCGCCGTTCGACTTTG TAATTTCCAACTGGAGTATGCCGAACATGGATGGCTTGTCTTTGTTGCAGGCCATTCGAGCCGACGGCGCCATGGCGGCG ATGCCGGTACTGATGGTGACCGCCGAAGCCATCCCCGATGCGCGCGATCGGCTGGATTATGTGGTGCAAATGACCGCTCA GGCGGCCGAACGGGCGCTGAATTGCGTCGAGGCCGCCCAGCCGCGCTTGAGCAAGGGGCGCGCACGCTGACGTCGCGCTG GGATGCGTGGTTCGCCGAGCCGATGCCGCTGGAACAGGCCCGCGAGCTGGTGGATGAAACGTGCCAGTATCTGGCCGGTG TGTCGGAGCAGACCGCTTTCACCCACGCCCAATTGCTGGAAATTATGATGGCGCAAGATTTCCAGGATCTGACCGGGCAG GTGATAAAACGCATGATGAATGTGGTGCAGGAAATTGAAAAACAGCTGCTGATGGTACTGCTGGAGAACATGCCCGAGAA GCTGGCCCAGCCGCGGGGTAGTGAACGACTGCTCAATGGCCCGCAATTGGATCATACCACCGCCGGCGTGGTGGCGAATC AGGATCAGGTGGACTACCTGCTCGACAGCCTCGGTTTTTAA
Upstream 100 bases:
>100_bases GTTAACCGCCATCGTCCTTCAGTGGACGTACTGTTCCATTCGGTGGCGAAATTCGCCGGCCGCAACACCGTTGGCGTTAT TTTGACCGGCATGGGCAACG
Downstream 100 bases:
>100_bases GACCGACGTCTGCCGGCGTCACCGGGCGGCTGGCCGACCCTATTGCCGGCGCCGCCGGTCTATCCTCTGAATATCCTGCT GTTTAGCCTTATGTTCGTGT
Product: chemotaxis protein CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MARRACGDAPGGRLDAGQAEGGAVRLCNFQLEYAEHGWLVFVAGHSSRRRHGGDAGTDGDRRSHPRCARSAGLCGANDRS GGRTGAELRRGRPAALEQGARTLTSRWDAWFAEPMPLEQARELVDETCQYLAGVSEQTAFTHAQLLEIMMAQDFQDLTGQ VIKRMMNVVQEIEKQLLMVLLENMPEKLAQPRGSERLLNGPQLDHTTAGVVANQDQVDYLLDSLGF
Sequences:
>Translated_226_residues MARRACGDAPGGRLDAGQAEGGAVRLCNFQLEYAEHGWLVFVAGHSSRRRHGGDAGTDGDRRSHPRCARSAGLCGANDRS GGRTGAELRRGRPAALEQGARTLTSRWDAWFAEPMPLEQARELVDETCQYLAGVSEQTAFTHAQLLEIMMAQDFQDLTGQ VIKRMMNVVQEIEKQLLMVLLENMPEKLAQPRGSERLLNGPQLDHTTAGVVANQDQVDYLLDSLGF >Mature_225_residues ARRACGDAPGGRLDAGQAEGGAVRLCNFQLEYAEHGWLVFVAGHSSRRRHGGDAGTDGDRRSHPRCARSAGLCGANDRSG GRTGAELRRGRPAALEQGARTLTSRWDAWFAEPMPLEQARELVDETCQYLAGVSEQTAFTHAQLLEIMMAQDFQDLTGQV IKRMMNVVQEIEKQLLMVLLENMPEKLAQPRGSERLLNGPQLDHTTAGVVANQDQVDYLLDSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=132, Percent_Identity=68.9393939393939, Blast_Score=187, Evalue=7e-49,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 24774; Mature: 24643
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRACGDAPGGRLDAGQAEGGAVRLCNFQLEYAEHGWLVFVAGHSSRRRHGGDAGTDGD CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC RRSHPRCARSAGLCGANDRSGGRTGAELRRGRPAALEQGARTLTSRWDAWFAEPMPLEQA CCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH RELVDETCQYLAGVSEQTAFTHAQLLEIMMAQDFQDLTGQVIKRMMNVVQEIEKQLLMVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENMPEKLAQPRGSERLLNGPQLDHTTAGVVANQDQVDYLLDSLGF HHHHHHHHHCCCCCHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure ARRACGDAPGGRLDAGQAEGGAVRLCNFQLEYAEHGWLVFVAGHSSRRRHGGDAGTDGD CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC RRSHPRCARSAGLCGANDRSGGRTGAELRRGRPAALEQGARTLTSRWDAWFAEPMPLEQA CCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH RELVDETCQYLAGVSEQTAFTHAQLLEIMMAQDFQDLTGQVIKRMMNVVQEIEKQLLMVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENMPEKLAQPRGSERLLNGPQLDHTTAGVVANQDQVDYLLDSLGF HHHHHHHHHCCCCCHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]