Click here to switch to the map view.

The map label for this gene is flhB [H]

Identifier: 85060041

GI number: 85060041

Start: 3561750

End: 3562487

Strand: Reverse

Name: flhB [H]

Synonym: SG2063

Alternate gene names: 85060041

Gene position: 3562487-3561750 (Counterclockwise)

Preceding gene: 85060042

Following gene: 85060038

Centisome position: 85.41

GC content: 55.69

Gene sequence:

>738_bases
ATGGCGGAAGACATTGATTTAGAAAAAAGCGAGGCGCCCACACAGCACCGACAGGAAAAAGCCCGTGAAGAGGGACAGAT
TCCCCGATCGCGCGAGCTGACCTCTATGCTGATGCTGCTGGTGGGATGCGCCATGCTCTGGCTTGACGGCGCTTACCTAG
CCCGCCAACTGGCGGCGATGCTCGCCCAGGGCCTGCATTTCGATCATGGTCTGATTGGCAAAGATCGCCAAAGTCTGACC
GCCGCCGCTCCGCTGCTCAGCCAGACCGTTCTGGCGCTAATATCGTTGTTCGCCGGGCTGATTCTGGTGGCCCTCGGCGC
GCCGATGTTGCTGGGTGGGATCACGTTCAATCCGTCGTTGATCAAGTTTGATATCAAAAAAGTCAATCCGCTTAGCGGAC
TAAAGCGGATGTTTTCCTCGCAAGTCTTGGCGGAGCTGTTCAAGGCGATACTGAAAGCGGTGGTATTTGGCTGCGTCACC
GGCAGCTTTTTATGGCACAACTGGCCGCGCATGCTGCATCTGGTTATGGAGCCCGCGGTGCCGGCTCTGGGTGATGCCAT
GTGGATCATCACCGCCTGTATGCTGTTTATCATCGTCGGCCTTAGCCCAATCGTCGGTTTCGACGTGTTCTGGCAACTCT
GGAGCCACCTAAAAAAACTGCGCATGATCCGTCAAGATATCCGCGATGAATTCAAAAATCAGGAAGGCGACCCCCATGTA
AAAAACCGCATCCGCTAG

Upstream 100 bases:

>100_bases
ATCCTGCTGTTTAGCCTTATGTTCGTGTCATAAAAATAGCGCGATTTTTGGCATTCTTACGCGCATTATTCCAACCGGCA
CTGTGCTTGCGGGATCCTGG

Downstream 100 bases:

>100_bases
CAGCAACGGGCCGTGGCCCGGCGCCGTATGATGGCCGATGTGCCCAAGGCGGACGTCGTGATTACCAACCCCACTCATTT
TGCGGTGGCGCTGCGCTATG

Product: putative flagellar biosynthetic protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAEDIDLEKSEAPTQHRQEKAREEGQIPRSRELTSMLMLLVGCAMLWLDGAYLARQLAAMLAQGLHFDHGLIGKDRQSLT
AAAPLLSQTVLALISLFAGLILVALGAPMLLGGITFNPSLIKFDIKKVNPLSGLKRMFSSQVLAELFKAILKAVVFGCVT
GSFLWHNWPRMLHLVMEPAVPALGDAMWIITACMLFIIVGLSPIVGFDVFWQLWSHLKKLRMIRQDIRDEFKNQEGDPHV
KNRIR

Sequences:

>Translated_245_residues
MAEDIDLEKSEAPTQHRQEKAREEGQIPRSRELTSMLMLLVGCAMLWLDGAYLARQLAAMLAQGLHFDHGLIGKDRQSLT
AAAPLLSQTVLALISLFAGLILVALGAPMLLGGITFNPSLIKFDIKKVNPLSGLKRMFSSQVLAELFKAILKAVVFGCVT
GSFLWHNWPRMLHLVMEPAVPALGDAMWIITACMLFIIVGLSPIVGFDVFWQLWSHLKKLRMIRQDIRDEFKNQEGDPHV
KNRIR
>Mature_244_residues
AEDIDLEKSEAPTQHRQEKAREEGQIPRSRELTSMLMLLVGCAMLWLDGAYLARQLAAMLAQGLHFDHGLIGKDRQSLTA
AAPLLSQTVLALISLFAGLILVALGAPMLLGGITFNPSLIKFDIKKVNPLSGLKRMFSSQVLAELFKAILKAVVFGCVTG
SFLWHNWPRMLHLVMEPAVPALGDAMWIITACMLFIIVGLSPIVGFDVFWQLWSHLKKLRMIRQDIRDEFKNQEGDPHVK
NRIR

Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=244, Percent_Identity=55.327868852459, Blast_Score=279, Evalue=1e-76,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 27396; Mature: 27265

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCC
>Mature Secondary Structure 
AEDIDLEKSEAPTQHRQEKAREEGQIPRSRELTSMLMLLVGCAMLWLDGAYLARQLAAM
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQGLHFDHGLIGKDRQSLTAAAPLLSQTVLALISLFAGLILVALGAPMLLGGITFNPSL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
IKFDIKKVNPLSGLKRMFSSQVLAELFKAILKAVVFGCVTGSFLWHNWPRMLHLVMEPAV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PALGDAMWIITACMLFIIVGLSPIVGFDVFWQLWSHLKKLRMIRQDIRDEFKNQEGDPHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KNRIR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA