| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is cocE [H]
Identifier: 85060028
GI number: 85060028
Start: 3536209
End: 3536892
Strand: Reverse
Name: cocE [H]
Synonym: SG2050
Alternate gene names: 85060028
Gene position: 3536892-3536209 (Counterclockwise)
Preceding gene: 85060029
Following gene: 85060027
Centisome position: 84.79
GC content: 56.58
Gene sequence:
>684_bases GTGCCGACCATCGGCGGCTCCTTAACCAGCGGCGAGCCTATTTTCACCGGCGGTGCGTTTGATCAGCGTGAAGATGCGCG CTTCTTAGGCTGCCGCCATCCCGGACTACCGCTTACCACTCGTCAGGATGTGTTGTCGTTCGAGACGCCGCCGCTTGCGC AGGATTTGGCGGTGATAGGCGAGGTATTCATCGAGTTGGTGGTGTCGACGGATGCGCCGGATACTGATTTCACCGCCAAG CTGATAGATGTCTACCCTCCCAGTGACGATTACCTGACCGGTTTTGCCATGAACATTACCGACGGCATTTTCCGCTGCCG CTATCGCAACGGTTTTAATAATCCGCAGCTTGTTACATCCGAGGAACCCTTTACTCTGCGTATCGAGCCCTTCGCCACCG CGAACCTGTTTAAAGCGGGCCACCGCATTCGCCTGGATATTTCCTCTAGCAATTTCCCGAAATACGATGTCAATCCCAAC AGCGGTGAACCGGAGAGAAGCGGACGCTGTCCGCGCAGCGCACTCAATACGGTACATTTAGCGCCGCAATTTCGCAGCCG TATGCTGCAGCAAACCCTGCCGTTTGCTGCGTTTAGCGTCGGTGGCGGCAGCCGTTGTCGGAATGAGGCGCTCATCGTCG GTTGCGATAACTGCAACCGGTTGCGGCGCCTGTTAACGATCTAA
Upstream 100 bases:
>100_bases CTGAACCATTAATGCTTTATCTGCAAGACGACATGAGCCTGTCTTCGCAGTCGCTTGCTGAACCTCCCGACTTAGCTACC GGTTTGATCCGACCCGGCTG
Downstream 100 bases:
>100_bases GGGGCATGCCATCTACGCCCGCGATCCTCTCCATTTCCAGGCAGCGCCACCTATCAGCTGACAAGTCCACCGTTTGCCAC CGGCGTTTTGCCGCATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPTIGGSLTSGEPIFTGGAFDQREDARFLGCRHPGLPLTTRQDVLSFETPPLAQDLAVIGEVFIELVVSTDAPDTDFTAK LIDVYPPSDDYLTGFAMNITDGIFRCRYRNGFNNPQLVTSEEPFTLRIEPFATANLFKAGHRIRLDISSSNFPKYDVNPN SGEPERSGRCPRSALNTVHLAPQFRSRMLQQTLPFAAFSVGGGSRCRNEALIVGCDNCNRLRRLLTI
Sequences:
>Translated_227_residues MPTIGGSLTSGEPIFTGGAFDQREDARFLGCRHPGLPLTTRQDVLSFETPPLAQDLAVIGEVFIELVVSTDAPDTDFTAK LIDVYPPSDDYLTGFAMNITDGIFRCRYRNGFNNPQLVTSEEPFTLRIEPFATANLFKAGHRIRLDISSSNFPKYDVNPN SGEPERSGRCPRSALNTVHLAPQFRSRMLQQTLPFAAFSVGGGSRCRNEALIVGCDNCNRLRRLLTI >Mature_226_residues PTIGGSLTSGEPIFTGGAFDQREDARFLGCRHPGLPLTTRQDVLSFETPPLAQDLAVIGEVFIELVVSTDAPDTDFTAKL IDVYPPSDDYLTGFAMNITDGIFRCRYRNGFNNPQLVTSEEPFTLRIEPFATANLFKAGHRIRLDISSSNFPKYDVNPNS GEPERSGRCPRSALNTVHLAPQFRSRMLQQTLPFAAFSVGGGSRCRNEALIVGCDNCNRLRRLLTI
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 25060; Mature: 24928
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIGGSLTSGEPIFTGGAFDQREDARFLGCRHPGLPLTTRQDVLSFETPPLAQDLAVIG CCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHH EVFIELVVSTDAPDTDFTAKLIDVYPPSDDYLTGFAMNITDGIFRCRYRNGFNNPQLVTS HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHEEEEECCCCCCCEEEEC EEPFTLRIEPFATANLFKAGHRIRLDISSSNFPKYDVNPNSGEPERSGRCPRSALNTVHL CCCEEEEECCCCHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHEEEE APQFRSRMLQQTLPFAAFSVGGGSRCRNEALIVGCDNCNRLRRLLTI CHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure PTIGGSLTSGEPIFTGGAFDQREDARFLGCRHPGLPLTTRQDVLSFETPPLAQDLAVIG CCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHH EVFIELVVSTDAPDTDFTAKLIDVYPPSDDYLTGFAMNITDGIFRCRYRNGFNNPQLVTS HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHEEEEECCCCCCCEEEEC EEPFTLRIEPFATANLFKAGHRIRLDISSSNFPKYDVNPNSGEPERSGRCPRSALNTVHL CCCEEEEECCCCHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHEEEE APQFRSRMLQQTLPFAAFSVGGGSRCRNEALIVGCDNCNRLRRLLTI CHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]