| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85060023
Identifier: 85060023
GI number: 85060023
Start: 3522429
End: 3522908
Strand: Reverse
Name: 85060023
Synonym: SG2045
Alternate gene names: NA
Gene position: 3522908-3522429 (Counterclockwise)
Preceding gene: 85060025
Following gene: 85060022
Centisome position: 84.46
GC content: 41.88
Gene sequence:
>480_bases ATGGATTCGGATAAATCAGGTGTTAATACTTTATCAAATAATCTATTAATTTCGTTCATGAAAACCAGCAGAGATCACTG GTTTATAAAAGATCTGGACTCACGTTATGTTTTTATGAATGAACTCTCGTTGAGATTTATGCGCTGTCCTAAGGGATATG ATGTCAGAGGCAAGTTAGAAAGTGAAGTAAAGCTGCCCAGCAGTATGGAATACTGGCCAGATTTTGTTGCCCTGGACCGC AAGACCATTCAGGACCGGAAGGTTGTGACTAATATTGAAGTCCATTATTATGGAGAAAATAATATTGATACTCCCGTAGC GCACCTCTGTCAGAGAACGCCACTGTACGACGGCGAAAACAACTGCCTGGGCATCGTCTGCTACGGTGTTCCTATTGACT CTCCGGCGCTGCTTTATTATATGAATAAATTTAACCGTACCACGGCGCAGTTCGATGCGCCGAGTGAAATATTTACTTAA
Upstream 100 bases:
>100_bases AATTTAAATAAAACCGGCTATGTAAACGTTGTTCGATTATAGTCATCTCGTTATAGTAGGGAGGTATTAACGGTAATATA AACACTATAGGGGAATTATT
Downstream 100 bases:
>100_bases AAGGAAATGGAAATTATCTTCTGGGCAAGGCAAAAACTTGCGGCGAAAGACATTGCCAGGCGGTTAAATATTTCCTATAG AACAATTAAAAATCGTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDSDKSGVNTLSNNLLISFMKTSRDHWFIKDLDSRYVFMNELSLRFMRCPKGYDVRGKLESEVKLPSSMEYWPDFVALDR KTIQDRKVVTNIEVHYYGENNIDTPVAHLCQRTPLYDGENNCLGIVCYGVPIDSPALLYYMNKFNRTTAQFDAPSEIFT
Sequences:
>Translated_159_residues MDSDKSGVNTLSNNLLISFMKTSRDHWFIKDLDSRYVFMNELSLRFMRCPKGYDVRGKLESEVKLPSSMEYWPDFVALDR KTIQDRKVVTNIEVHYYGENNIDTPVAHLCQRTPLYDGENNCLGIVCYGVPIDSPALLYYMNKFNRTTAQFDAPSEIFT >Mature_159_residues MDSDKSGVNTLSNNLLISFMKTSRDHWFIKDLDSRYVFMNELSLRFMRCPKGYDVRGKLESEVKLPSSMEYWPDFVALDR KTIQDRKVVTNIEVHYYGENNIDTPVAHLCQRTPLYDGENNCLGIVCYGVPIDSPALLYYMNKFNRTTAQFDAPSEIFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18442; Mature: 18442
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDKSGVNTLSNNLLISFMKTSRDHWFIKDLDSRYVFMNELSLRFMRCPKGYDVRGKLE CCCCCCCHHHHCCCEEEEEEECCCCEEEEEECCCEEEEEEHHEEEEEECCCCCCCCCCCC SEVKLPSSMEYWPDFVALDRKTIQDRKVVTNIEVHYYGENNIDTPVAHLCQRTPLYDGEN CCEECCCCCCCCCCHHHHCCHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCC NCLGIVCYGVPIDSPALLYYMNKFNRTTAQFDAPSEIFT CEEEEEEECCCCCCCCEEEEEHHCCCCEECCCCCHHCCC >Mature Secondary Structure MDSDKSGVNTLSNNLLISFMKTSRDHWFIKDLDSRYVFMNELSLRFMRCPKGYDVRGKLE CCCCCCCHHHHCCCEEEEEEECCCCEEEEEECCCEEEEEEHHEEEEEECCCCCCCCCCCC SEVKLPSSMEYWPDFVALDRKTIQDRKVVTNIEVHYYGENNIDTPVAHLCQRTPLYDGEN CCEECCCCCCCCCCHHHHCCHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCC NCLGIVCYGVPIDSPALLYYMNKFNRTTAQFDAPSEIFT CEEEEEEECCCCCCCCEEEEEHHCCCCEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA