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The map label for this gene is ygdL [H]

Identifier: 85059937

GI number: 85059937

Start: 3368556

End: 3369380

Strand: Reverse

Name: ygdL [H]

Synonym: SG1959

Alternate gene names: 85059937

Gene position: 3369380-3368556 (Counterclockwise)

Preceding gene: 85059938

Following gene: 85059934

Centisome position: 80.78

GC content: 59.88

Gene sequence:

>825_bases
ATGAATGATGACCTATCAGACGCCTGGTTGCAGCGCTTTGGCGGCACCGCCCGGCTGTATGGCCGGGATGCGCTGGCGGT
CTTCGCTGCCGCCCACGTCTGCGTGATCGGTATAGGCGGGGTAGGTTCCTGGGCGGCGGAAGCGCTGGTCCGTACCGGTA
TCGGCGCGATAACTCTCATTGATATGGACGACGTGTGCGTCACCAATATCAACCGACAAATCCACGCCCTGCGCGACCGC
GTCGGGCAGCCGAAAATCGCGGTAATGGCCGAACGGCTCGCGGCCATTAATCCCGAATGTCGGGTCACCGCTATCGATGA
TTTCATCACGGCCGACAACGTGGCCCAAAGGCTGAATGGCGGCTTCGATTATGTCATTGACGCTATCGACAGCGTAAGGG
CCAAAGCGGCGCTGCTGGCGTATTGCCGGCGCTATAAAATTCCGGTGGTGTGCGTGGGCGCCGCCGGTGGCCAGACCGAT
CCCACTCGCATTCAGGTGGTGGATCTGGCGAAAACCATTCAGGATCCGCTGGCGGCAAAAGTGCGCGATCGCCTGAAGCA
AAAGTTTCAAGTAGTGAAAAATAGCAAGGGCAAGCTGGGCATCGACTGCGTTTTTTCCAGCGAACAGCTGGTTTATCCCC
AGCTCGATGGTTCAGTCTGCGCCTCGCCGTCGACGGCGGGGGGAGCCAAACGAATGGACTGCGCATCGGGGTTTGGCGCT
GCGACCATGGTGACCGCGACATTTGGATTTGTCGCCGTGGCTCATGCGCTGAAAAAAATGCTGACCAAAGCGCGGCGGCA
GCACGCCACACCGCCCTTAGCCTGA

Upstream 100 bases:

>100_bases
AACACCGTGCAGGTCATCTACGATAATTGACCGGCGGCGGAGGTTTCACCCTTTATCAAGCGGCCTGTGGGCCGCTTTTG
TTAACTGAGGCACCATGAAC

Downstream 100 bases:

>100_bases
CCCAATGCGGTCTGGCGTGGCGCTGGCCTGCGGTCGTTTGCTGCGCTAGCTTACAGCGGACAACGGAGAGGGGAGAGCGG
ACAACGCTCGACGCCCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNDDLSDAWLQRFGGTARLYGRDALAVFAAAHVCVIGIGGVGSWAAEALVRTGIGAITLIDMDDVCVTNINRQIHALRDR
VGQPKIAVMAERLAAINPECRVTAIDDFITADNVAQRLNGGFDYVIDAIDSVRAKAALLAYCRRYKIPVVCVGAAGGQTD
PTRIQVVDLAKTIQDPLAAKVRDRLKQKFQVVKNSKGKLGIDCVFSSEQLVYPQLDGSVCASPSTAGGAKRMDCASGFGA
ATMVTATFGFVAVAHALKKMLTKARRQHATPPLA

Sequences:

>Translated_274_residues
MNDDLSDAWLQRFGGTARLYGRDALAVFAAAHVCVIGIGGVGSWAAEALVRTGIGAITLIDMDDVCVTNINRQIHALRDR
VGQPKIAVMAERLAAINPECRVTAIDDFITADNVAQRLNGGFDYVIDAIDSVRAKAALLAYCRRYKIPVVCVGAAGGQTD
PTRIQVVDLAKTIQDPLAAKVRDRLKQKFQVVKNSKGKLGIDCVFSSEQLVYPQLDGSVCASPSTAGGAKRMDCASGFGA
ATMVTATFGFVAVAHALKKMLTKARRQHATPPLA
>Mature_274_residues
MNDDLSDAWLQRFGGTARLYGRDALAVFAAAHVCVIGIGGVGSWAAEALVRTGIGAITLIDMDDVCVTNINRQIHALRDR
VGQPKIAVMAERLAAINPECRVTAIDDFITADNVAQRLNGGFDYVIDAIDSVRAKAALLAYCRRYKIPVVCVGAAGGQTD
PTRIQVVDLAKTIQDPLAAKVRDRLKQKFQVVKNSKGKLGIDCVFSSEQLVYPQLDGSVCASPSTAGGAKRMDCASGFGA
ATMVTATFGFVAVAHALKKMLTKARRQHATPPLA

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Homo sapiens, GI4885649, Length=140, Percent_Identity=30, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789177, Length=263, Percent_Identity=77.9467680608365, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1787048, Length=149, Percent_Identity=31.5436241610738, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082356, Length=126, Percent_Identity=30.952380952381, Blast_Score=71, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6322825, Length=203, Percent_Identity=34.9753694581281, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321790, Length=193, Percent_Identity=26.9430051813472, Blast_Score=96, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24660640, Length=126, Percent_Identity=31.7460317460317, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29146; Mature: 29146

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDLSDAWLQRFGGTARLYGRDALAVFAAAHVCVIGIGGVGSWAAEALVRTGIGAITLI
CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEE
DMDDVCVTNINRQIHALRDRVGQPKIAVMAERLAAINPECRVTAIDDFITADNVAQRLNG
ECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC
GFDYVIDAIDSVRAKAALLAYCRRYKIPVVCVGAAGGQTDPTRIQVVDLAKTIQDPLAAK
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHH
VRDRLKQKFQVVKNSKGKLGIDCVFSSEQLVYPQLDGSVCASPSTAGGAKRMDCASGFGA
HHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCH
ATMVTATFGFVAVAHALKKMLTKARRQHATPPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDDLSDAWLQRFGGTARLYGRDALAVFAAAHVCVIGIGGVGSWAAEALVRTGIGAITLI
CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEE
DMDDVCVTNINRQIHALRDRVGQPKIAVMAERLAAINPECRVTAIDDFITADNVAQRLNG
ECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC
GFDYVIDAIDSVRAKAALLAYCRRYKIPVVCVGAAGGQTDPTRIQVVDLAKTIQDPLAAK
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHH
VRDRLKQKFQVVKNSKGKLGIDCVFSSEQLVYPQLDGSVCASPSTAGGAKRMDCASGFGA
HHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCH
ATMVTATFGFVAVAHALKKMLTKARRQHATPPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]