| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is cdsA
Identifier: 85059915
GI number: 85059915
Start: 3341984
End: 3342841
Strand: Reverse
Name: cdsA
Synonym: SG1937
Alternate gene names: 85059915
Gene position: 3342841-3341984 (Counterclockwise)
Preceding gene: 85059916
Following gene: 85059914
Centisome position: 80.14
GC content: 61.07
Gene sequence:
>858_bases TTGCTGAAGTATCGCCTGATTACTGCCTTGGTCCTGATACCCATAGTTATCGCCGCACTGTTTTTGTTGCCGTCGGTTGG CTTTGCCCTGGTCACCCTCGCGGTGTGCATGCTCAGCGCCTGGGAATGGGGCCAGCTCGCGGGACTGGCCTCGCGCAGCC AGCGTATCTGGCTGGCCATTCTCTGCGGCCTGCTGCTGGCGCTGATGATGCTCACCGTGCCGGCCTATCGGCCGTTCATG ACCGTCTGGCAGGCGCAATATGCCCTGTGGGCCGCCCTGGCCTGGTGGCTGGCGGCGGCGCTGCTGGTGTTGTGCTACCC CCGCTCCGCCACGCTGTGGCGTGAATCTCGGCCGCTGCGGCTGGCATTCGGCATCCTGACCATTTTGCCCTTCTTCTGGG GGATGCTGGCGCTGCGTCAGCACCATTATGATATTAACCACTTCACCGGCGCCTGGTGGCTATTGTATGTCATTGTGCTG GTGTGGGGCTCGGATTCCGGCGCTTACATGTTCGGGCGCGCGCTGGGTCGCCATAAGCTGGCGCCAAAAGTCTCTCCCGG TAAAACCTGGGAAGGGTTGGTGGGCGGGTTGGTCACCTCCGCGGTCATCGCCTGGCTGTTTGGCAAGTATGCGCCGCTTG ACGCCGCACCGCTTACGCTGCTGGTCTGCTCAATCGTGGCGGCACTGGCGTCGGTGTTGGGTGATTTAACCGAAAGTATG TTCAAACGGGAGGCAGGAATCAAGGACAGCGGCCATTTAATCCCCGGCCATGGCGGCATTTTAGATCGTATAGACAGCCT GACCGCCGCAGTGCCGGTGTTCGCCTGTCTGATGCTGCTGGTCTTTAACGCTATCTGA
Upstream 100 bases:
>100_bases CGACGCTGTTTTTGAAGGTGCGCTGGATGCTTTTGCTCAACGCGAGCGGCGCTTCGGTGGAACAACACCTAATGATGCCA ACGCATCCTAAGGGGGATTT
Downstream 100 bases:
>100_bases GTCGGGACTGGGAGCGCTTATGCTGCACTTTTTCTGGATTCTTGCCGCGTTTATCGTGGCGCTGGGCGTTTTGATAACGG TGCACGAGTTCGGCCATTTT
Product: CDP-diglyceride synthase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLKYRLITALVLIPIVIAALFLLPSVGFALVTLAVCMLSAWEWGQLAGLASRSQRIWLAILCGLLLALMMLTVPAYRPFM TVWQAQYALWAALAWWLAAALLVLCYPRSATLWRESRPLRLAFGILTILPFFWGMLALRQHHYDINHFTGAWWLLYVIVL VWGSDSGAYMFGRALGRHKLAPKVSPGKTWEGLVGGLVTSAVIAWLFGKYAPLDAAPLTLLVCSIVAALASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVFNAI
Sequences:
>Translated_285_residues MLKYRLITALVLIPIVIAALFLLPSVGFALVTLAVCMLSAWEWGQLAGLASRSQRIWLAILCGLLLALMMLTVPAYRPFM TVWQAQYALWAALAWWLAAALLVLCYPRSATLWRESRPLRLAFGILTILPFFWGMLALRQHHYDINHFTGAWWLLYVIVL VWGSDSGAYMFGRALGRHKLAPKVSPGKTWEGLVGGLVTSAVIAWLFGKYAPLDAAPLTLLVCSIVAALASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVFNAI >Mature_285_residues MLKYRLITALVLIPIVIAALFLLPSVGFALVTLAVCMLSAWEWGQLAGLASRSQRIWLAILCGLLLALMMLTVPAYRPFM TVWQAQYALWAALAWWLAAALLVLCYPRSATLWRESRPLRLAFGILTILPFFWGMLALRQHHYDINHFTGAWWLLYVIVL VWGSDSGAYMFGRALGRHKLAPKVSPGKTWEGLVGGLVTSAVIAWLFGKYAPLDAAPLTLLVCSIVAALASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVFNAI
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=285, Percent_Identity=73.3333333333333, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI1787677, Length=112, Percent_Identity=45.5357142857143, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31276; Mature: 31276
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYRLITALVLIPIVIAALFLLPSVGFALVTLAVCMLSAWEWGQLAGLASRSQRIWLAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LCGLLLALMMLTVPAYRPFMTVWQAQYALWAALAWWLAAALLVLCYPRSATLWRESRPLR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH LAFGILTILPFFWGMLALRQHHYDINHFTGAWWLLYVIVLVWGSDSGAYMFGRALGRHKL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKVSPGKTWEGLVGGLVTSAVIAWLFGKYAPLDAAPLTLLVCSIVAALASVLGDLTESM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVFNAI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKYRLITALVLIPIVIAALFLLPSVGFALVTLAVCMLSAWEWGQLAGLASRSQRIWLAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LCGLLLALMMLTVPAYRPFMTVWQAQYALWAALAWWLAAALLVLCYPRSATLWRESRPLR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH LAFGILTILPFFWGMLALRQHHYDINHFTGAWWLLYVIVLVWGSDSGAYMFGRALGRHKL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKVSPGKTWEGLVGGLVTSAVIAWLFGKYAPLDAAPLTLLVCSIVAALASVLGDLTESM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVFNAI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]