| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is gmhB [H]
Identifier: 85059892
GI number: 85059892
Start: 3311490
End: 3312062
Strand: Reverse
Name: gmhB [H]
Synonym: SG1914
Alternate gene names: 85059892
Gene position: 3312062-3311490 (Counterclockwise)
Preceding gene: 85059899
Following gene: 85059891
Centisome position: 79.4
GC content: 55.67
Gene sequence:
>573_bases GTGGCACAGTCTGTTTCCGCAATTTTTTTAGACCGTGACGGCACGATTAATGCCGATAACGGTTATGTCCATGAGATTGA CGATTTTCAGTTCATCGACGGCGTGATCGAAGCCATGCAGGAATTGAAAAAGATGGGGTTTGCCTTGGTGATGGTCACCA ATCAATCCGGACTGGCCCGCGGCCTTTTCAGCGAAGATCAGTTTATGCGTCTGACGGAATGGATGGACTGGTCATTGGCG GATCGCGACGTCGATTTGGACGGTATCTACTTTTGCCCCCATCATCCGCAGGCGGTGGTTGAGGCATTACGTCAGGAATG CGATTGCCGCAAGCCAAAACCCGGAATGCTGCTGGACGCACAGCGCCACCTGCATATCGACATGGCTTCTTCCTATATAG CGGGCGACAAACTGGACGATATGCTAGCGGCCCAGGCGGCGGGGGTTGGCACGCGGGTCTTGGTGCGCAGCGGTAAAGCG GTAACGGAGCAAGCCAGCGCGGCGGCGGATTGGGTCATTGATAGCCTCGCTGCATTACCGGCCGCGATTAAACAGCGTCA AGCGGGCGCGTAA
Upstream 100 bases:
>100_bases ATACGTCTAAGTCAACTGCGTTACGTTCCATTTTATGGGTTTCTCTTCCCATGTCAAAACATGCGATACTTACGGCTTAC CCGTAATCAGGAGCCTTGCA
Downstream 100 bases:
>100_bases CGGATATTTAGTGAACGTTTGAAAAAAAGTAAGGATATTCCCTTGTCATTTCAGAACGGCTCCCTATAATGTGCCTCCAT CGACCGGTCATGTGAACATC
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAQSVSAIFLDRDGTINADNGYVHEIDDFQFIDGVIEAMQELKKMGFALVMVTNQSGLARGLFSEDQFMRLTEWMDWSLA DRDVDLDGIYFCPHHPQAVVEALRQECDCRKPKPGMLLDAQRHLHIDMASSYIAGDKLDDMLAAQAAGVGTRVLVRSGKA VTEQASAAADWVIDSLAALPAAIKQRQAGA
Sequences:
>Translated_190_residues MAQSVSAIFLDRDGTINADNGYVHEIDDFQFIDGVIEAMQELKKMGFALVMVTNQSGLARGLFSEDQFMRLTEWMDWSLA DRDVDLDGIYFCPHHPQAVVEALRQECDCRKPKPGMLLDAQRHLHIDMASSYIAGDKLDDMLAAQAAGVGTRVLVRSGKA VTEQASAAADWVIDSLAALPAAIKQRQAGA >Mature_189_residues AQSVSAIFLDRDGTINADNGYVHEIDDFQFIDGVIEAMQELKKMGFALVMVTNQSGLARGLFSEDQFMRLTEWMDWSLAD RDVDLDGIYFCPHHPQAVVEALRQECDCRKPKPGMLLDAQRHLHIDMASSYIAGDKLDDMLAAQAAGVGTRVLVRSGKAV TEQASAAADWVIDSLAALPAAIKQRQAGA
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=190, Percent_Identity=74.2105263157895, Blast_Score=301, Evalue=2e-83, Organism=Escherichia coli, GI87082027, Length=149, Percent_Identity=33.5570469798658, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.1.-
Molecular weight: Translated: 20813; Mature: 20682
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSVSAIFLDRDGTINADNGYVHEIDDFQFIDGVIEAMQELKKMGFALVMVTNQSGLAR CCCCCEEEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH GLFSEDQFMRLTEWMDWSLADRDVDLDGIYFCPHHPQAVVEALRQECDCRKPKPGMLLDA CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEECC QRHLHIDMASSYIAGDKLDDMLAAQAAGVGTRVLVRSGKAVTEQASAAADWVIDSLAALP CHHEEEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AAIKQRQAGA HHHHHHCCCC >Mature Secondary Structure AQSVSAIFLDRDGTINADNGYVHEIDDFQFIDGVIEAMQELKKMGFALVMVTNQSGLAR CCCCEEEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH GLFSEDQFMRLTEWMDWSLADRDVDLDGIYFCPHHPQAVVEALRQECDCRKPKPGMLLDA CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEECC QRHLHIDMASSYIAGDKLDDMLAAQAAGVGTRVLVRSGKAVTEQASAAADWVIDSLAALP CHHEEEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AAIKQRQAGA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11108008; 11206551; 11258796 [H]