| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is cysP [H]
Identifier: 85059687
GI number: 85059687
Start: 2919406
End: 2920422
Strand: Reverse
Name: cysP [H]
Synonym: SG1709
Alternate gene names: 85059687
Gene position: 2920422-2919406 (Counterclockwise)
Preceding gene: 85059689
Following gene: 85059686
Centisome position: 70.01
GC content: 56.54
Gene sequence:
>1017_bases ATGACCTTTACGCTTTTTTTCGGGCGGGCAAGACAAATTTGCGCCGTAGTGGCATTGTTGGCATACGGACAAGCACAGGC CACCACATTGCTTAACAGCTCCTATGACGTGGCACGTGAACTTTTCGCGACCCTCAATCCCGGTTTTATCGCGCAGTGGC AGCAGGAACATCCGGGCGACAAACTGACCCTGCGCCAGTCGCACGCCGGCTCTTCCCGGCAGGCGCTGACCATACTGCAG GGATTTCCGGCGGATGTGGTGACCTATAATCAGGTCACCGATGTACAGATTCTCCACGATCGCGGCCAATTGATTGCCGC CGATTGGCGTGACCGCTTACCCAATCAGAGTTCGCCTTATTACTCAACCATGGCGTTTCTGGTGCGCAAAGGAAATCCAA AAGGGATCCATGACTGGCGCGATCTGGCCCGTGACGGCGTGCAGCTGGTGTTTCCCAATCCCAAGACCTCGGGAAACGGT CGCTACACCTATTTAGCCGCCTGGGGCGCGATGGAGCAGGCGTTTGGTGGCGACCGCACCCGCACCTGGATGCAGAAATT TCTGGCCAACGTCGAGGTGTTCGATACCGGCGGGCGTGGCGCAACGACGACCTTCATCGAACGCGGTCAGGGGGATGTGC TGATTAGTTTTGAATCAGAGGTCAACACGCTGCGCGATCAGGCCGGCGCCGGCGACTACGAAGTTATCGTGCCGGACACG GATATTCTGGCGGAATTTCCGGTGGCCTGGGTAGATAAGAACGTGGAAGAGAACGGAACCGCGCAGGTGGCGAAAGCGTA CCTCAACTATCTCTATAGTCCGGCGGCGCAGCACATTATCGCCGGGTTTTATTATCGGGTAAACGATACACAGATGATGA ACGTAAACAAAAGCAAATTTCCACCGACCCGGCTGTTTCGTGTTGAGGATATATTCGGCGGTTGGCATTCGGCTATGGCG ACGCACTTCGAGCGCGGCGGCGAACTGGATCAATTATTGGCGGCGGGCCATCGCTGA
Upstream 100 bases:
>100_bases ACCAATCGATATATAAAAGCGTTATAGGTTATCCCCTCGTTATAAATAAACTGTAAGACTCTCAGGGCGGCCTTTTTGTC CATCAACATCAGGACACAAC
Downstream 100 bases:
>100_bases TGCTGGTCCTGACCACCAAACGGGTCCTGCCCGGTTTTAGCCTGAGCCTCGGCGGCAGCGTGCTGTTCGTTTGCTTGATC CTGCTGCTGCCGTTAAGCGC
Product: thiosulfate transporter subunit
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTFTLFFGRARQICAVVALLAYGQAQATTLLNSSYDVARELFATLNPGFIAQWQQEHPGDKLTLRQSHAGSSRQALTILQ GFPADVVTYNQVTDVQILHDRGQLIAADWRDRLPNQSSPYYSTMAFLVRKGNPKGIHDWRDLARDGVQLVFPNPKTSGNG RYTYLAAWGAMEQAFGGDRTRTWMQKFLANVEVFDTGGRGATTTFIERGQGDVLISFESEVNTLRDQAGAGDYEVIVPDT DILAEFPVAWVDKNVEENGTAQVAKAYLNYLYSPAAQHIIAGFYYRVNDTQMMNVNKSKFPPTRLFRVEDIFGGWHSAMA THFERGGELDQLLAAGHR
Sequences:
>Translated_338_residues MTFTLFFGRARQICAVVALLAYGQAQATTLLNSSYDVARELFATLNPGFIAQWQQEHPGDKLTLRQSHAGSSRQALTILQ GFPADVVTYNQVTDVQILHDRGQLIAADWRDRLPNQSSPYYSTMAFLVRKGNPKGIHDWRDLARDGVQLVFPNPKTSGNG RYTYLAAWGAMEQAFGGDRTRTWMQKFLANVEVFDTGGRGATTTFIERGQGDVLISFESEVNTLRDQAGAGDYEVIVPDT DILAEFPVAWVDKNVEENGTAQVAKAYLNYLYSPAAQHIIAGFYYRVNDTQMMNVNKSKFPPTRLFRVEDIFGGWHSAMA THFERGGELDQLLAAGHR >Mature_337_residues TFTLFFGRARQICAVVALLAYGQAQATTLLNSSYDVARELFATLNPGFIAQWQQEHPGDKLTLRQSHAGSSRQALTILQG FPADVVTYNQVTDVQILHDRGQLIAADWRDRLPNQSSPYYSTMAFLVRKGNPKGIHDWRDLARDGVQLVFPNPKTSGNGR YTYLAAWGAMEQAFGGDRTRTWMQKFLANVEVFDTGGRGATTTFIERGQGDVLISFESEVNTLRDQAGAGDYEVIVPDTD ILAEFPVAWVDKNVEENGTAQVAKAYLNYLYSPAAQHIIAGFYYRVNDTQMMNVNKSKFPPTRLFRVEDIFGGWHSAMAT HFERGGELDQLLAAGHR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. This protein specifically binds thiosulfate and is involved in its transmembrane transport [H]
COG id: COG4150
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1788765, Length=316, Percent_Identity=70.8860759493671, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI1790351, Length=310, Percent_Identity=46.4516129032258, Blast_Score=289, Evalue=2e-79,
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37744; Mature: 37613
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTLFFGRARQICAVVALLAYGQAQATTLLNSSYDVARELFATLNPGFIAQWQQEHPGD CEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCEECHHHCCCCC KLTLRQSHAGSSRQALTILQGFPADVVTYNQVTDVQILHDRGQLIAADWRDRLPNQSSPY EEEEEECCCCCCCCEEHHHHCCCCCEEEECCCCCEEEEECCCCEEEECHHHCCCCCCCCH YSTMAFLVRKGNPKGIHDWRDLARDGVQLVFPNPKTSGNGRYTYLAAWGAMEQAFGGDRT HHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHHHHHCCCHH RTWMQKFLANVEVFDTGGRGATTTFIERGQGDVLISFESEVNTLRDQAGAGDYEVIVPDT HHHHHHHHCCCEEEECCCCCCCHHHEECCCCCEEEEECHHHHHHHHHCCCCCEEEEECCH DILAEFPVAWVDKNVEENGTAQVAKAYLNYLYSPAAQHIIAGFYYRVNDTQMMNVNKSKF HHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCC PPTRLFRVEDIFGGWHSAMATHFERGGELDQLLAAGHR CCHHEEEEHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure TFTLFFGRARQICAVVALLAYGQAQATTLLNSSYDVARELFATLNPGFIAQWQQEHPGD EEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCEECHHHCCCCC KLTLRQSHAGSSRQALTILQGFPADVVTYNQVTDVQILHDRGQLIAADWRDRLPNQSSPY EEEEEECCCCCCCCEEHHHHCCCCCEEEECCCCCEEEEECCCCEEEECHHHCCCCCCCCH YSTMAFLVRKGNPKGIHDWRDLARDGVQLVFPNPKTSGNGRYTYLAAWGAMEQAFGGDRT HHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHHHHHCCCHH RTWMQKFLANVEVFDTGGRGATTTFIERGQGDVLISFESEVNTLRDQAGAGDYEVIVPDT HHHHHHHHCCCEEEECCCCCCCHHHEECCCCCEEEEECHHHHHHHHHCCCCCEEEEECCH DILAEFPVAWVDKNVEENGTAQVAKAYLNYLYSPAAQHIIAGFYYRVNDTQMMNVNKSKF HHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCC PPTRLFRVEDIFGGWHSAMATHFERGGELDQLLAAGHR CCHHEEEEHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2188959; 9205837; 9278503; 9298646 [H]