| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059628
Identifier: 85059628
GI number: 85059628
Start: 2821082
End: 2821666
Strand: Reverse
Name: 85059628
Synonym: SG1650
Alternate gene names: NA
Gene position: 2821666-2821082 (Counterclockwise)
Preceding gene: 85059631
Following gene: 85059627
Centisome position: 67.65
GC content: 32.65
Gene sequence:
>585_bases ATGAATATCAGTGACCTTGATGATAAGTACGGACAATATGGCTTCATTAAATCGGATTTAGAATATTTGTTAGGTTTTTA TTTAAACAGTGATGTAAAACCCTTACCAGATTATTTATATCCATACAAAACTCGGTTTGGCATTACTATAAAAGAATCTG CTAATATTATGGCAGGTTTTAAGCCAATGGATAATGTTACGGTAGTCGATAAAGCTGAATTATTCCATGCTTATTTAGAT TCTCTTTGGGATGCTGTAGATAACGGATTACTCAATGCAACCAAGATTGAAGAAGAATACTATAACGACGAAAAATATAG AGTAAATGCCATCCTAATAAAAGATGAAGTAACTATATGGGCTGAGAAAAATAATATTCAGTGGCCTTTTGGTGTGGAAG AGCGTAGTGGAGGTGGAGAAAAAACAAAAGAAAGTACTGATGATATTATCAAAAGATTAATGGCTGAAAATGAAAAATTG AAAAATGAAATATCAGAAGTTCGGGAGCTGCTGCCTATTCTACTTAAAACATATCGTGATGATGATCCTCTTACACTAGA AATTGAAATTCGGAGAGAAAATTGA
Upstream 100 bases:
>100_bases TTCCTTGTGAACATGAACCATCTCTTAGGCAACTTCTTATAGATATTGTACGAGGCGATGAGTCTGCATTTGCTATTACA TTTTAAATGGAATAATAAAA
Downstream 100 bases:
>100_bases ATTAATTATGATCCTGATAATGATAGGGCAACGAGAGATAATCAAGAGGCAATAGTGCATTATCTTGAAACAAAAGGATT TACAAACCGTCAGGCTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNISDLDDKYGQYGFIKSDLEYLLGFYLNSDVKPLPDYLYPYKTRFGITIKESANIMAGFKPMDNVTVVDKAELFHAYLD SLWDAVDNGLLNATKIEEEYYNDEKYRVNAILIKDEVTIWAEKNNIQWPFGVEERSGGGEKTKESTDDIIKRLMAENEKL KNEISEVRELLPILLKTYRDDDPLTLEIEIRREN
Sequences:
>Translated_194_residues MNISDLDDKYGQYGFIKSDLEYLLGFYLNSDVKPLPDYLYPYKTRFGITIKESANIMAGFKPMDNVTVVDKAELFHAYLD SLWDAVDNGLLNATKIEEEYYNDEKYRVNAILIKDEVTIWAEKNNIQWPFGVEERSGGGEKTKESTDDIIKRLMAENEKL KNEISEVRELLPILLKTYRDDDPLTLEIEIRREN >Mature_194_residues MNISDLDDKYGQYGFIKSDLEYLLGFYLNSDVKPLPDYLYPYKTRFGITIKESANIMAGFKPMDNVTVVDKAELFHAYLD SLWDAVDNGLLNATKIEEEYYNDEKYRVNAILIKDEVTIWAEKNNIQWPFGVEERSGGGEKTKESTDDIIKRLMAENEKL KNEISEVRELLPILLKTYRDDDPLTLEIEIRREN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22607; Mature: 22607
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISDLDDKYGQYGFIKSDLEYLLGFYLNSDVKPLPDYLYPYKTRFGITIKESANIMAGF CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEECEEEECCCCEEECC KPMDNVTVVDKAELFHAYLDSLWDAVDNGLLNATKIEEEYYNDEKYRVNAILIKDEVTIW CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCEEEE AEKNNIQWPFGVEERSGGGEKTKESTDDIIKRLMAENEKLKNEISEVRELLPILLKTYRD EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC DDPLTLEIEIRREN CCCEEEEEEEEECC >Mature Secondary Structure MNISDLDDKYGQYGFIKSDLEYLLGFYLNSDVKPLPDYLYPYKTRFGITIKESANIMAGF CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEECEEEECCCCEEECC KPMDNVTVVDKAELFHAYLDSLWDAVDNGLLNATKIEEEYYNDEKYRVNAILIKDEVTIW CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCEEEE AEKNNIQWPFGVEERSGGGEKTKESTDDIIKRLMAENEKLKNEISEVRELLPILLKTYRD EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC DDPLTLEIEIRREN CCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA