| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059627
Identifier: 85059627
GI number: 85059627
Start: 2818881
End: 2819351
Strand: Reverse
Name: 85059627
Synonym: SG1649
Alternate gene names: NA
Gene position: 2819351-2818881 (Counterclockwise)
Preceding gene: 85059628
Following gene: 85059626
Centisome position: 67.59
GC content: 47.56
Gene sequence:
>471_bases TTGACGTGTGTATCACCTATGCGTAATGTGATACACACCTTAATTCTGATAAGGTCTAAGAATAGCGGGGCCCAGAAGGA TTGCACTCCATTCCGGGCCTCTAACCACAATGTAACAGAGGCTTACACTATGGCATTTCTACATAGTACCCAAACTCGCC CCAAATTTACAGATACATATTGGATCGTCCCGTGTTACGAGACGACGCCTTACGGCAAAGTGTCGTTCACACGTCAAGAT CGCTGTATCTTCATCGCCATGTTCAAAGACAGCCGCCTGATATGTGCTGGGCGTCAACCTGTTGGCTCAACCACGTATGG AAAACATACGAGGTCGCAAAAGGAGGGCGTTAAACATACGATGTTGCATGAAGGCATAGAGGAAATCTTTACCCCCAAAG GTATGGTCAACATCACCCCACCTTCAACCATAACGAACATCGTTACAGTTCAGGGGGTGGCACATGCGTGA
Upstream 100 bases:
>100_bases AAAAAGCTGTGACTTAGCGTTTTTATTTCCTGTTGCCATCACTTACTCTCTGTTGTTTCGGTGTGTTTCAGTATACGCAA AAAAACCTAGAGAAAAAGTC
Downstream 100 bases:
>100_bases AGAAATCACATTAGAGCCGATTGACGCCTTAATCAAAATTGAGGCATTAGCCGCTGCCGCTGCGCACCTTACCGATGATG AATATGAACGCGCATTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTCVSPMRNVIHTLILIRSKNSGAQKDCTPFRASNHNVTEAYTMAFLHSTQTRPKFTDTYWIVPCYETTPYGKVSFTRQD RCIFIAMFKDSRLICAGRQPVGSTTYGKHTRSQKEGVKHTMLHEGIEEIFTPKGMVNITPPSTITNIVTVQGVAHA
Sequences:
>Translated_156_residues MTCVSPMRNVIHTLILIRSKNSGAQKDCTPFRASNHNVTEAYTMAFLHSTQTRPKFTDTYWIVPCYETTPYGKVSFTRQD RCIFIAMFKDSRLICAGRQPVGSTTYGKHTRSQKEGVKHTMLHEGIEEIFTPKGMVNITPPSTITNIVTVQGVAHA >Mature_155_residues TCVSPMRNVIHTLILIRSKNSGAQKDCTPFRASNHNVTEAYTMAFLHSTQTRPKFTDTYWIVPCYETTPYGKVSFTRQDR CIFIAMFKDSRLICAGRQPVGSTTYGKHTRSQKEGVKHTMLHEGIEEIFTPKGMVNITPPSTITNIVTVQGVAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17525; Mature: 17394
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCVSPMRNVIHTLILIRSKNSGAQKDCTPFRASNHNVTEAYTMAFLHSTQTRPKFTDTY CCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE WIVPCYETTPYGKVSFTRQDRCIFIAMFKDSRLICAGRQPVGSTTYGKHTRSQKEGVKHT EEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHCHHHH MLHEGIEEIFTPKGMVNITPPSTITNIVTVQGVAHA HHHHHHHHHCCCCCEEEECCCCHHHEEEEEEEECCC >Mature Secondary Structure TCVSPMRNVIHTLILIRSKNSGAQKDCTPFRASNHNVTEAYTMAFLHSTQTRPKFTDTY CCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE WIVPCYETTPYGKVSFTRQDRCIFIAMFKDSRLICAGRQPVGSTTYGKHTRSQKEGVKHT EEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHCHHHH MLHEGIEEIFTPKGMVNITPPSTITNIVTVQGVAHA HHHHHHHHHCCCCCEEEECCCCHHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA