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The map label for this gene is ydeU [C]

Identifier: 85059450

GI number: 85059450

Start: 2460569

End: 2461201

Strand: Reverse

Name: ydeU [C]

Synonym: SG1472

Alternate gene names: 85059450

Gene position: 2461201-2460569 (Counterclockwise)

Preceding gene: 85059451

Following gene: 85059448

Centisome position: 59.01

GC content: 62.72

Gene sequence:

>633_bases
ATGACAACGTCACCGGGGACGAGGATCAAGACCGGCTCGCTGATGGCTCCCCCGTTTGCGCCACAGACAGCGATTATCCC
GGAGGTCGGGATTTACGCCGCCAATCATGCCGTAGCGAACACCCTATTCCTCAGCCGACGCGCAGAACGTAACGGCACGA
CCAGAATGGCCTTTGGGACGCTGGCGATGGACGCGGACCCTCGCAGCACGCTATGGCTGCGTATCCTTGGCGGGAAGACG
CATGTCTTCGTCGGTGACGGCCGTCTGCAGACCAGCACCACACGTCAGATCGTGCAAGGCGGCGGCACAATTTTGCAATT
TAGCCGCAGCGGACGAGACAGCGGGTACCTGGGTATCATGTTCGGCGCCGGTAAAAGCACGACGGAAAGCCGCTCTACCT
CTCAGCCTTTCGGCGTGCAAACCGGTCGCGCCCGATATGTGCAGGACGGCCGCCGCCAATTGACCGAGTTCAAAGTCGGT
CACGAAGGGCAACTGACCCCGCAAATCGGCGTCTGGGGTCATGTGGCCCATCAGCGCGGCGCTGGATCCGGCGCCGCGAC
GCGAACGGATGTCGCCCGCCGCCAGCGCACCGTTTTCGCCTGCGGTAAGCCGACATGTCCTGGAACAGCATGA

Upstream 100 bases:

>100_bases
GCGCTAAACGTGACGGTGCTGACCGAAGCCCGGTTAACGAGGCTGACCGACGAGGAATCCGGCGATCTTCACCTTCTCCT
ATAAGCAAACGATAACCTCC

Downstream 100 bases:

>100_bases
TGAGCTCTGTCGCCACACGGTGGGGAGAAAATGAGCTGCGCCGTAGCCGGCCGAAGAACTTTTTCATACCCTGCGCATGA
CCAAGCGGCTTCTCAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTTSPGTRIKTGSLMAPPFAPQTAIIPEVGIYAANHAVANTLFLSRRAERNGTTRMAFGTLAMDADPRSTLWLRILGGKT
HVFVGDGRLQTSTTRQIVQGGGTILQFSRSGRDSGYLGIMFGAGKSTTESRSTSQPFGVQTGRARYVQDGRRQLTEFKVG
HEGQLTPQIGVWGHVAHQRGAGSGAATRTDVARRQRTVFACGKPTCPGTA

Sequences:

>Translated_210_residues
MTTSPGTRIKTGSLMAPPFAPQTAIIPEVGIYAANHAVANTLFLSRRAERNGTTRMAFGTLAMDADPRSTLWLRILGGKT
HVFVGDGRLQTSTTRQIVQGGGTILQFSRSGRDSGYLGIMFGAGKSTTESRSTSQPFGVQTGRARYVQDGRRQLTEFKVG
HEGQLTPQIGVWGHVAHQRGAGSGAATRTDVARRQRTVFACGKPTCPGTA
>Mature_209_residues
TTSPGTRIKTGSLMAPPFAPQTAIIPEVGIYAANHAVANTLFLSRRAERNGTTRMAFGTLAMDADPRSTLWLRILGGKTH
VFVGDGRLQTSTTRQIVQGGGTILQFSRSGRDSGYLGIMFGAGKSTTESRSTSQPFGVQTGRARYVQDGRRQLTEFKVGH
EGQLTPQIGVWGHVAHQRGAGSGAATRTDVARRQRTVFACGKPTCPGTA

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22392; Mature: 22260

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPGTRIKTGSLMAPPFAPQTAIIPEVGIYAANHAVANTLFLSRRAERNGTTRMAFGT
CCCCCCCEEECCCEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
LAMDADPRSTLWLRILGGKTHVFVGDGRLQTSTTRQIVQGGGTILQFSRSGRDSGYLGIM
EEECCCCCCEEEEEEECCCEEEEEECCEEECHHHHHHHHCCCEEEEEECCCCCCCEEEEE
FGAGKSTTESRSTSQPFGVQTGRARYVQDGRRQLTEFKVGHEGQLTPQIGVWGHVAHQRG
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCC
AGSGAATRTDVARRQRTVFACGKPTCPGTA
CCCCCCHHHHHHHHHCEEEECCCCCCCCCC
>Mature Secondary Structure 
TTSPGTRIKTGSLMAPPFAPQTAIIPEVGIYAANHAVANTLFLSRRAERNGTTRMAFGT
CCCCCCEEECCCEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
LAMDADPRSTLWLRILGGKTHVFVGDGRLQTSTTRQIVQGGGTILQFSRSGRDSGYLGIM
EEECCCCCCEEEEEEECCCEEEEEECCEEECHHHHHHHHCCCEEEEEECCCCCCCEEEEE
FGAGKSTTESRSTSQPFGVQTGRARYVQDGRRQLTEFKVGHEGQLTPQIGVWGHVAHQRG
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHCC
AGSGAATRTDVARRQRTVFACGKPTCPGTA
CCCCCCHHHHHHHHHCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA