| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is pykF [H]
Identifier: 85059416
GI number: 85059416
Start: 2405862
End: 2407274
Strand: Reverse
Name: pykF [H]
Synonym: SG1438
Alternate gene names: 85059416
Gene position: 2407274-2405862 (Counterclockwise)
Preceding gene: 85059419
Following gene: 85059415
Centisome position: 57.71
GC content: 54.85
Gene sequence:
>1413_bases ATGAAAAAGACTAAAATTGTTTGTACCATCGGCCCGAAAACCGAATCCGAAGAGGTACTGTCCAGCCTGCTTGATGCAGG TATGAACGTCATGCGTCTCAATTTTTCCCATGGTGATTATGAAGAGCACGGTCAGCGCATCAAAAATCTGCGTGCGGTGT TGAAAAGAACCGATCAGCAGGCCGCGATTCTGCTTGATACTAAGGGCCCCGAAATCCGCACCATGAAATTGGTAAACGGC GCCGATGTCTCGCTGCGCGCCGGCCAAACCTTTACCTTTACGACCGATCAGAGCATTATTGGCAACAGTGAACGCGTTGC GGTCACCTATCCGGGGTTCACCCAGGATCTGGCGGTAGGTAATACCATTCTGGTCGATGACGGTCTGCTGGGCATGACCG TGACCAGCGTCACCCAGGACCAGGTTGTATGTAAGGTACTCAACAATGGCGATTTGGGTGAAAACAAAGGGGTTAACCTG CCCGGTGTGTCCATTCCCCTACCCGCGCTGGCGGAAAAAGATAAACGCGACTTGATTTTTGGCTGCGAACAAGGCGTCGA TTTTATCGCTGCCTCCTTTATTCGCAAACGTTCCGACGTACTGGAAATCCGCGAATACCTGGAACAGCACGGCGGCAGCC ATATCCAGATCATCTCTAAAATCGAAAACCAGGAAGGGCTGAATAATTTCGACGAAATCCTCGAAGCCTCCGACGGCATT ATGGTAGCCCGCGGCGATCTCGGTGTCGAAATTCCGGTGGAAGAAGTGATTTTCGCGCAGAAAATGATGATCGAAAAGTG TAACCGGGCGCGCAAGGTGGTGATTACCGCGACCCAAATGCTCGACTCGATGATCAAAAACCCGCGTCCGACCCGCGCGG AAGCCGGCGACGTGGCCAACGCCATTCTGGATGGTACGGACGCCGTGATGCTGTCCGGCGAGAGCGCCAAAGGTAAATAC CCGCTGGAAGCCGTGACCATTATGGCCACTATCTGCCAGCGCACCGATCGAATGCTGCCGAGCCGCATCGACAGCCTGAA CGATAGCCGCAAACTTCGCATTACCGAAGCGGTCTGCCGCAGCGCGGTCGAAACCGCAGAAAAACTGGAATCGCCGCTGA TTGTAGTCGCGACCGAGGGCGGCAAATCCGCCAAGTCAGTGCGTAAATATTTCCCGAAAGCGGAAATTCTGGCCCTGACC ACGAACCCGCTGACCGCCCGCCAGCTTCTGCTGAGCAAAGGGGTGTCCTGCCAGCTTGTCGAAGAAATCGCGTCGACCGA TGATTTCTACCGCATCGGCAAGGCAATGGCGTTGGAAACTGGTTTAGCGGCCAAGGGCGACATTATCGTCATGGTGTCCG GCGCGCTGGTACCGAGCGGCACCACCAACACCGCCTCGGTGCATATGCTGTAA
Upstream 100 bases:
>100_bases AAAATGGACCGCAGGTTTGAAGCGGCTTTTTTTTCATCGTGGGCCTGGTCCGGTGATGCACCAGCTTTATCATTCATCAC AAATTATAGAAATCAACGTT
Downstream 100 bases:
>100_bases CGCAGGCCGGGGGCAGGCATGTCTGTCTCCCTATTCTTGCGGCACTGCACGACGTAGCGCCGCCGCTGGCGCGGTGCGCT TAGAGCAGATCCAGCTCATC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-1 [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKKTKIVCTIGPKTESEEVLSSLLDAGMNVMRLNFSHGDYEEHGQRIKNLRAVLKRTDQQAAILLDTKGPEIRTMKLVNG ADVSLRAGQTFTFTTDQSIIGNSERVAVTYPGFTQDLAVGNTILVDDGLLGMTVTSVTQDQVVCKVLNNGDLGENKGVNL PGVSIPLPALAEKDKRDLIFGCEQGVDFIAASFIRKRSDVLEIREYLEQHGGSHIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICQRTDRMLPSRIDSLNDSRKLRITEAVCRSAVETAEKLESPLIVVATEGGKSAKSVRKYFPKAEILALT TNPLTARQLLLSKGVSCQLVEEIASTDDFYRIGKAMALETGLAAKGDIIVMVSGALVPSGTTNTASVHML
Sequences:
>Translated_470_residues MKKTKIVCTIGPKTESEEVLSSLLDAGMNVMRLNFSHGDYEEHGQRIKNLRAVLKRTDQQAAILLDTKGPEIRTMKLVNG ADVSLRAGQTFTFTTDQSIIGNSERVAVTYPGFTQDLAVGNTILVDDGLLGMTVTSVTQDQVVCKVLNNGDLGENKGVNL PGVSIPLPALAEKDKRDLIFGCEQGVDFIAASFIRKRSDVLEIREYLEQHGGSHIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICQRTDRMLPSRIDSLNDSRKLRITEAVCRSAVETAEKLESPLIVVATEGGKSAKSVRKYFPKAEILALT TNPLTARQLLLSKGVSCQLVEEIASTDDFYRIGKAMALETGLAAKGDIIVMVSGALVPSGTTNTASVHML >Mature_470_residues MKKTKIVCTIGPKTESEEVLSSLLDAGMNVMRLNFSHGDYEEHGQRIKNLRAVLKRTDQQAAILLDTKGPEIRTMKLVNG ADVSLRAGQTFTFTTDQSIIGNSERVAVTYPGFTQDLAVGNTILVDDGLLGMTVTSVTQDQVVCKVLNNGDLGENKGVNL PGVSIPLPALAEKDKRDLIFGCEQGVDFIAASFIRKRSDVLEIREYLEQHGGSHIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICQRTDRMLPSRIDSLNDSRKLRITEAVCRSAVETAEKLESPLIVVATEGGKSAKSVRKYFPKAEILALT TNPLTARQLLLSKGVSCQLVEEIASTDDFYRIGKAMALETGLAAKGDIIVMVSGALVPSGTTNTASVHML
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=487, Percent_Identity=47.8439425051335, Blast_Score=407, Evalue=1e-113, Organism=Homo sapiens, GI33286420, Length=487, Percent_Identity=47.8439425051335, Blast_Score=407, Evalue=1e-113, Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=48.155737704918, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI10835121, Length=488, Percent_Identity=45.4918032786885, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI32967597, Length=488, Percent_Identity=45.4918032786885, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=51.2110726643599, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=51.2110726643599, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=45.9915611814346, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=45.9915611814346, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=45.8333333333333, Blast_Score=171, Evalue=2e-42, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=83.1914893617021, Blast_Score=811, Evalue=0.0, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=36.5904365904366, Blast_Score=265, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17544584, Length=479, Percent_Identity=41.9624217118998, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17506829, Length=480, Percent_Identity=46.0416666666667, Blast_Score=357, Evalue=1e-98, Organism=Caenorhabditis elegans, GI71984413, Length=480, Percent_Identity=46.0416666666667, Blast_Score=356, Evalue=1e-98, Organism=Caenorhabditis elegans, GI71984406, Length=480, Percent_Identity=46.0416666666667, Blast_Score=356, Evalue=1e-98, Organism=Caenorhabditis elegans, GI17506831, Length=480, Percent_Identity=46.0416666666667, Blast_Score=355, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6319279, Length=481, Percent_Identity=45.3222453222453, Blast_Score=353, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6324923, Length=483, Percent_Identity=43.2712215320911, Blast_Score=339, Evalue=5e-94, Organism=Drosophila melanogaster, GI28571814, Length=480, Percent_Identity=47.0833333333333, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24648964, Length=480, Percent_Identity=47.0833333333333, Blast_Score=390, Evalue=1e-108, Organism=Drosophila melanogaster, GI24648966, Length=446, Percent_Identity=45.9641255605381, Blast_Score=344, Evalue=6e-95, Organism=Drosophila melanogaster, GI24581235, Length=482, Percent_Identity=36.9294605809129, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI24646914, Length=301, Percent_Identity=45.514950166113, Blast_Score=210, Evalue=2e-54,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50897; Mature: 50897
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKIVCTIGPKTESEEVLSSLLDAGMNVMRLNFSHGDYEEHGQRIKNLRAVLKRTDQQ CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC AAILLDTKGPEIRTMKLVNGADVSLRAGQTFTFTTDQSIIGNSERVAVTYPGFTQDLAVG EEEEEECCCCCEEEEEEECCCCEEEECCCEEEEECCCHHCCCCCEEEEECCCCCHHHHCC NTILVDDGLLGMTVTSVTQDQVVCKVLNNGDLGENKGVNLPGVSIPLPALAEKDKRDLIF CEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEE GCEQGVDFIAASFIRKRSDVLEIREYLEQHGGSHIQIISKIENQEGLNNFDEILEASDGI ECHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCE MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCCCCCCCCHHHHHH AILDGTDAVMLSGESAKGKYPLEAVTIMATICQRTDRMLPSRIDSLNDSRKLRITEAVCR HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH SAVETAEKLESPLIVVATEGGKSAKSVRKYFPKAEILALTTNPLTARQLLLSKGVSCQLV HHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCHHHH EEIASTDDFYRIGKAMALETGLAAKGDIIVMVSGALVPSGTTNTASVHML HHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEC >Mature Secondary Structure MKKTKIVCTIGPKTESEEVLSSLLDAGMNVMRLNFSHGDYEEHGQRIKNLRAVLKRTDQQ CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC AAILLDTKGPEIRTMKLVNGADVSLRAGQTFTFTTDQSIIGNSERVAVTYPGFTQDLAVG EEEEEECCCCCEEEEEEECCCCEEEECCCEEEEECCCHHCCCCCEEEEECCCCCHHHHCC NTILVDDGLLGMTVTSVTQDQVVCKVLNNGDLGENKGVNLPGVSIPLPALAEKDKRDLIF CEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEE GCEQGVDFIAASFIRKRSDVLEIREYLEQHGGSHIQIISKIENQEGLNNFDEILEASDGI ECHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCE MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCCCCCCCCHHHHHH AILDGTDAVMLSGESAKGKYPLEAVTIMATICQRTDRMLPSRIDSLNDSRKLRITEAVCR HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH SAVETAEKLESPLIVVATEGGKSAKSVRKYFPKAEILALTTNPLTARQLLLSKGVSCQLV HHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCHHHH EEIASTDDFYRIGKAMALETGLAAKGDIIVMVSGALVPSGTTNTASVHML HHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]