| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yeaD [H]
Identifier: 85059324
GI number: 85059324
Start: 2239539
End: 2240411
Strand: Reverse
Name: yeaD [H]
Synonym: SG1346
Alternate gene names: 85059324
Gene position: 2240411-2239539 (Counterclockwise)
Preceding gene: 85059325
Following gene: 85059323
Centisome position: 53.71
GC content: 59.68
Gene sequence:
>873_bases ATGTCCGACTCTCTTCTTGCCTTGCCCGTCAAGCAAACGCTGTCGCCGTCGTTAACACTGCGCCAGCAGGATCAGTTGCT GCTGGTGGCGGTGGACCATCCGCAGGTGCGGGCGGCGATCACGTTGCAGGGGGCGCATCTTATCGCCTGGCAGCCCACCG GCGAGCAACCGGTGCTATGGTTAAGCGAGAAAAGCGCTTTTCAGGAAGGCCTGGCTATACGCGGTGGCGTGCCCATTTGC TGGCCCTGGTTTGGCAAGATCGCTACCCCGAATCATGGCTTCGCCCGTATTCTACCGTGGGAACTGAGCGATCACAGCGA GGACGGCCAACAGGTACAACTGACCTTTACCCTGCGCGATAGCACCCTGACCGAACCCTTTTTCCCCCACCCGTTCACGC TTAAAGCCCATTTTACGCTCGGGCAGACCTGCAGTATCGAACTGGTGGCCGAGGGTGAGTATCAGGCAACGGCCGCGCTG CACAGCTATTTCACCGTGGGAGCCATCGGCGATATCCACGTCAGCGGCCTCGGCGCCAACTTTATCGATAAGGTCAACGG CGCCTTGCCTGCCCAGCAACAGGGAGATTTGACCTTTTCCGGCGAAGTGGACCGCGTTTACACCGCGCCGGCGGAAACCA GCCTGATTCATGATCCGGTGCTGGGGCGGGTGATTGAAGTCCACCATCAGCATCATAGCGACGTCGTGTCCTGGAACTGT GGGCAATCGCTGTCGCAATCGATCGGCGATTTGGCTGATGACAGTTACCTGAGCTATGTGTGTGTGGAGACGGCGCGGGT CAATGCACCGCTTATCAGCACCTCCGCCACGCCGGCGCGCTTAAGGCAAACGCTGCGTCTGCGTAAGTCCTGA
Upstream 100 bases:
>100_bases TGGATCTGATCTCCCATATCGCCAACAAATAAGCGTGGTGACCAGATGACGAAAGGGCGGCAGCGATGTCGCCCTTTTTC TTTTACTCAGGAGGTATATC
Downstream 100 bases:
>100_bases GCCGGCGCAAGCGGTAACCCGCAACAACGGGAGCGCGGCGCCCACGCCTTGCAACGCTGGCAGGAAGCTTAACCGCTAAC GCGGCGCCGCGGTCGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPIC WPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAAL HSYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS
Sequences:
>Translated_290_residues MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPIC WPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAAL HSYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS >Mature_289_residues SDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPICW PWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALH SYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNCG QSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=293, Percent_Identity=51.877133105802, Blast_Score=310, Evalue=8e-86, Organism=Drosophila melanogaster, GI19921284, Length=266, Percent_Identity=30.0751879699248, Blast_Score=111, Evalue=6e-25,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 31686; Mature: 31555
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLW CCCCEEEEEHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEE LSEKSAFQEGLAIRGGVPICWPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRD EECHHHHHCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEC STLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALHSYFTVGAIGDIHVSGLGAN CCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEECCCCH FIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC HHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS CHHHHHHHHHCCCCCCEEEEEEEEHCCCCCEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure SDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLW CCCEEEEEHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEE LSEKSAFQEGLAIRGGVPICWPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRD EECHHHHHCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEC STLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALHSYFTVGAIGDIHVSGLGAN CCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEECCCCH FIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC HHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS CHHHHHHHHHCCCCCCEEEEEEEEHCCCCCEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]