Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

Click here to switch to the map view.

The map label for this gene is yeaD [H]

Identifier: 85059324

GI number: 85059324

Start: 2239539

End: 2240411

Strand: Reverse

Name: yeaD [H]

Synonym: SG1346

Alternate gene names: 85059324

Gene position: 2240411-2239539 (Counterclockwise)

Preceding gene: 85059325

Following gene: 85059323

Centisome position: 53.71

GC content: 59.68

Gene sequence:

>873_bases
ATGTCCGACTCTCTTCTTGCCTTGCCCGTCAAGCAAACGCTGTCGCCGTCGTTAACACTGCGCCAGCAGGATCAGTTGCT
GCTGGTGGCGGTGGACCATCCGCAGGTGCGGGCGGCGATCACGTTGCAGGGGGCGCATCTTATCGCCTGGCAGCCCACCG
GCGAGCAACCGGTGCTATGGTTAAGCGAGAAAAGCGCTTTTCAGGAAGGCCTGGCTATACGCGGTGGCGTGCCCATTTGC
TGGCCCTGGTTTGGCAAGATCGCTACCCCGAATCATGGCTTCGCCCGTATTCTACCGTGGGAACTGAGCGATCACAGCGA
GGACGGCCAACAGGTACAACTGACCTTTACCCTGCGCGATAGCACCCTGACCGAACCCTTTTTCCCCCACCCGTTCACGC
TTAAAGCCCATTTTACGCTCGGGCAGACCTGCAGTATCGAACTGGTGGCCGAGGGTGAGTATCAGGCAACGGCCGCGCTG
CACAGCTATTTCACCGTGGGAGCCATCGGCGATATCCACGTCAGCGGCCTCGGCGCCAACTTTATCGATAAGGTCAACGG
CGCCTTGCCTGCCCAGCAACAGGGAGATTTGACCTTTTCCGGCGAAGTGGACCGCGTTTACACCGCGCCGGCGGAAACCA
GCCTGATTCATGATCCGGTGCTGGGGCGGGTGATTGAAGTCCACCATCAGCATCATAGCGACGTCGTGTCCTGGAACTGT
GGGCAATCGCTGTCGCAATCGATCGGCGATTTGGCTGATGACAGTTACCTGAGCTATGTGTGTGTGGAGACGGCGCGGGT
CAATGCACCGCTTATCAGCACCTCCGCCACGCCGGCGCGCTTAAGGCAAACGCTGCGTCTGCGTAAGTCCTGA

Upstream 100 bases:

>100_bases
TGGATCTGATCTCCCATATCGCCAACAAATAAGCGTGGTGACCAGATGACGAAAGGGCGGCAGCGATGTCGCCCTTTTTC
TTTTACTCAGGAGGTATATC

Downstream 100 bases:

>100_bases
GCCGGCGCAAGCGGTAACCCGCAACAACGGGAGCGCGGCGCCCACGCCTTGCAACGCTGGCAGGAAGCTTAACCGCTAAC
GCGGCGCCGCGGTCGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPIC
WPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAAL
HSYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC
GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS

Sequences:

>Translated_290_residues
MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPIC
WPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAAL
HSYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC
GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS
>Mature_289_residues
SDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLWLSEKSAFQEGLAIRGGVPICW
PWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRDSTLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALH
SYFTVGAIGDIHVSGLGANFIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNCG
QSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS

Specific function: Unknown

COG id: COG0676

COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87081973, Length=293, Percent_Identity=51.877133105802, Blast_Score=310, Evalue=8e-86,
Organism=Drosophila melanogaster, GI19921284, Length=266, Percent_Identity=30.0751879699248, Blast_Score=111, Evalue=6e-25,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: =5.1.3.15 [H]

Molecular weight: Translated: 31686; Mature: 31555

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLW
CCCCEEEEEHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEE
LSEKSAFQEGLAIRGGVPICWPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRD
EECHHHHHCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEC
STLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALHSYFTVGAIGDIHVSGLGAN
CCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEECCCCH
FIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC
HHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS
CHHHHHHHHHCCCCCCEEEEEEEEHCCCCCEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SDSLLALPVKQTLSPSLTLRQQDQLLLVAVDHPQVRAAITLQGAHLIAWQPTGEQPVLW
CCCEEEEEHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEE
LSEKSAFQEGLAIRGGVPICWPWFGKIATPNHGFARILPWELSDHSEDGQQVQLTFTLRD
EECHHHHHCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEC
STLTEPFFPHPFTLKAHFTLGQTCSIELVAEGEYQATAALHSYFTVGAIGDIHVSGLGAN
CCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEECCCCH
FIDKVNGALPAQQQGDLTFSGEVDRVYTAPAETSLIHDPVLGRVIEVHHQHHSDVVSWNC
HHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
GQSLSQSIGDLADDSYLSYVCVETARVNAPLISTSATPARLRQTLRLRKS
CHHHHHHHHHCCCCCCEEEEEEEEHCCCCCEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 9298646; 10493123 [H]