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The map label for this gene is ycgB [H]

Identifier: 85059319

GI number: 85059319

Start: 2224974

End: 2226509

Strand: Reverse

Name: ycgB [H]

Synonym: SG1341

Alternate gene names: 85059319

Gene position: 2226509-2224974 (Counterclockwise)

Preceding gene: 85059321

Following gene: 85059318

Centisome position: 53.38

GC content: 49.35

Gene sequence:

>1536_bases
ATGACTATGTCTATTAATGAACGATCACCTTCTGCCACATGTCTTAGCGATGGACCGGATTGGACATTTGAACTGCTCCA
GCAATATCTCGATGAAATTGACCGGGTAGCCAAACATTATCGGCTGGACACCTATCCCCATCAAATAGAAGTTATCACTT
CCGAACAAATGATGGATGCCTACTCCAGCGTGGGTATGCCTATCAATTACACCCACTGGTCTTTCGGCAAGAAGTTCATT
GAAACCGAACAGCGCTATAAGCACGGCCAACAGGGATTGGCCTATGAGATTGTGATTAACTCCAATCCTTGTATCGCCTA
TCTGATGGAAGAAAACACTATAACCATGCAGGCGCTGGTCATGGCCCATGCCTGTTACGGGCACAACTCGTTTTTCAAAA
ACAATTATCTTTTTCGCAGTTGGACTGACGCCAGCTCCATTGTCGACTACCTGATTTTCGCCCGCAACTATATTACCAAA
TGCGAAGAGCGTTACGGCGTCGAGCAGGTTGAACAATTGCTGGACTCCTGCCATGCACTGATAAATCACGGCGTCGACCG
CTATAAACGCCCGCAGAAGATCTCGCTGCAGAACGAAAAATCCCGGCAAAAAAGCCGTGAAGAATATTTACAAAGTCAGG
TCAATGAACTGTGGCGTACACTGCCACGCAGGGAAAAGGAAGAAGTGCAGGAACAGAGTTTGCGCTATCCCCAGGAACCG
CAGGAAAACCTGCTGTACTTTATGGAGAAAAACGCGCCGTTGCTCGAACCCTGGCAGCGGGAAATATTACGCATCGTGCG
TAAAGTCAGCCAGTATTTTTACCCACAAAAACAGACCCAGGTGATGAATGAAGGGTGGGCCACCTTCTGGCACTATACCA
TTCTTAATCACCTGTACGATGAAGGCAAAGTCAGCGACAGGTTTATGCTGGAGTTTTTGCACAGCCATACCAATGTCGTC
TACCAACCGTCCTATAACAGCCCGTATTACAACGGTATCAATCCCTATGCGCTAGGCTTCGCCATGTTCCAGGACATTAA
GCGTATTTGCCAATCGCCCACCGCGGAAGATCGGCGCTGGTTCCCCGACATCGCCGGCAGCGATTGGCTGGAAACCGTGC
ATTTCGCCATGCACAATTTCAAGGATGAAAGTTTTATCAGTCAATTCCTGTCGCCGAAAGTGATGCGAGATTTTCGCTTG
TTTACGGTGCTTGACGACGATCATAACAATTATCTGGAAATTGTGGCTATTCATAACGAGGAGGGGTATCAGGCGCTACG
CCAAGAGCTCTCCTCGCAGTACAATTTGAGTAACCTGGAACCGGATATTCAGATCTGGAATGTGGATCTGCGTGGCGATC
GCTCGCTGACGCTGCGCTATACGCCGCAAAATCGCGCGCCGCTAGCGAAAAGCCGCCGTGAAGTAATGAAGCATATCCAC
CGGCTGTGGAACTTCGACGTCTACATGGAGCAAGTCAACGACGAGGGGAATGTCGAGCTTATCGAACATTGCCAGCCACG
CCAGCCGCCGCTTTAG

Upstream 100 bases:

>100_bases
AAGGGATTGCCCTATCGCATCATTCGCGATTTTCATCTTGCGCTAGGAATAATAATAAGACAGCATGATCTCGTACTGTC
TGTAACGATGAGGTGCGCTG

Downstream 100 bases:

>100_bases
CCCACTTCGACCGGCCGCCGTCCGTCCCGGGGCGGCGCCCAGGCATCGCCGGCAGTCATGTGCCGACAATATCCTTAGGC
ATAGCGGATTGCATAGCGTT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTMSINERSPSATCLSDGPDWTFELLQQYLDEIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITK
CEERYGVEQVEQLLDSCHALINHGVDRYKRPQKISLQNEKSRQKSREEYLQSQVNELWRTLPRREKEEVQEQSLRYPQEP
QENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVSDRFMLEFLHSHTNVV
YQPSYNSPYYNGINPYALGFAMFQDIKRICQSPTAEDRRWFPDIAGSDWLETVHFAMHNFKDESFISQFLSPKVMRDFRL
FTVLDDDHNNYLEIVAIHNEEGYQALRQELSSQYNLSNLEPDIQIWNVDLRGDRSLTLRYTPQNRAPLAKSRREVMKHIH
RLWNFDVYMEQVNDEGNVELIEHCQPRQPPL

Sequences:

>Translated_511_residues
MTMSINERSPSATCLSDGPDWTFELLQQYLDEIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITK
CEERYGVEQVEQLLDSCHALINHGVDRYKRPQKISLQNEKSRQKSREEYLQSQVNELWRTLPRREKEEVQEQSLRYPQEP
QENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVSDRFMLEFLHSHTNVV
YQPSYNSPYYNGINPYALGFAMFQDIKRICQSPTAEDRRWFPDIAGSDWLETVHFAMHNFKDESFISQFLSPKVMRDFRL
FTVLDDDHNNYLEIVAIHNEEGYQALRQELSSQYNLSNLEPDIQIWNVDLRGDRSLTLRYTPQNRAPLAKSRREVMKHIH
RLWNFDVYMEQVNDEGNVELIEHCQPRQPPL
>Mature_510_residues
TMSINERSPSATCLSDGPDWTFELLQQYLDEIDRVAKHYRLDTYPHQIEVITSEQMMDAYSSVGMPINYTHWSFGKKFIE
TEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITKC
EERYGVEQVEQLLDSCHALINHGVDRYKRPQKISLQNEKSRQKSREEYLQSQVNELWRTLPRREKEEVQEQSLRYPQEPQ
ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVSDRFMLEFLHSHTNVVY
QPSYNSPYYNGINPYALGFAMFQDIKRICQSPTAEDRRWFPDIAGSDWLETVHFAMHNFKDESFISQFLSPKVMRDFRLF
TVLDDDHNNYLEIVAIHNEEGYQALRQELSSQYNLSNLEPDIQIWNVDLRGDRSLTLRYTPQNRAPLAKSRREVMKHIHR
LWNFDVYMEQVNDEGNVELIEHCQPRQPPL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=508, Percent_Identity=83.8582677165354, Blast_Score=907, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60931; Mature: 60800

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSINERSPSATCLSDGPDWTFELLQQYLDEIDRVAKHYRLDTYPHQIEVITSEQMMDA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYTHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITKCEERYGVEQVEQLLDSCHAL
HHHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INHGVDRYKRPQKISLQNEKSRQKSREEYLQSQVNELWRTLPRREKEEVQEQSLRYPQEP
HHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
QENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHC
EGKVSDRFMLEFLHSHTNVVYQPSYNSPYYNGINPYALGFAMFQDIKRICQSPTAEDRRW
CCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FPDIAGSDWLETVHFAMHNFKDESFISQFLSPKVMRDFRLFTVLDDDHNNYLEIVAIHNE
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHEEEEEEEECCCCCEEEEEEEECC
EGYQALRQELSSQYNLSNLEPDIQIWNVDLRGDRSLTLRYTPQNRAPLAKSRREVMKHIH
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
RLWNFDVYMEQVNDEGNVELIEHCQPRQPPL
HHHCHHHHHHHHCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TMSINERSPSATCLSDGPDWTFELLQQYLDEIDRVAKHYRLDTYPHQIEVITSEQMMDA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYTHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALV
HHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITKCEERYGVEQVEQLLDSCHAL
HHHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INHGVDRYKRPQKISLQNEKSRQKSREEYLQSQVNELWRTLPRREKEEVQEQSLRYPQEP
HHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
QENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD
HHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHC
EGKVSDRFMLEFLHSHTNVVYQPSYNSPYYNGINPYALGFAMFQDIKRICQSPTAEDRRW
CCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FPDIAGSDWLETVHFAMHNFKDESFISQFLSPKVMRDFRLFTVLDDDHNNYLEIVAIHNE
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHEEEEEEEECCCCCEEEEEEEECC
EGYQALRQELSSQYNLSNLEPDIQIWNVDLRGDRSLTLRYTPQNRAPLAKSRREVMKHIH
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
RLWNFDVYMEQVNDEGNVELIEHCQPRQPPL
HHHCHHHHHHHHCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]