| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059222
Identifier: 85059222
GI number: 85059222
Start: 2100313
End: 2101137
Strand: Reverse
Name: 85059222
Synonym: SG1244
Alternate gene names: NA
Gene position: 2101137-2100313 (Counterclockwise)
Preceding gene: 85059223
Following gene: 85059221
Centisome position: 50.37
GC content: 45.09
Gene sequence:
>825_bases ATGCTAAATCCAATCGCTAAGTTTCTGCTGGACCTGCTCCATCATCAGCTGAAATATTCGCGGGTTTTAAAAAAATGGCC GAACCTGATTCATCCGACCACCTTTAGCGAGAAAATTACGCTTAGGAACCTGTGGCCAAAATCTATCTACACAGACTTGA CGGATAAACATAAAGTCAGAAAATATATTGCCTCCACCATCGGTGAGAAGTATCTCATCAATCTCTATTGTCGCTGCGAT GAGCTCACGGAAGACATTTTCGACTCGCTGCCGACGTCTTTTGTCATCAAGGCCAATCATAGCTCCGGCTTCAATCAGGT GGTCTATGATAAATTGTCGATTACCTTTGTAGAATTGAGCGGGACCACTCGGTTTTGGACAAAAAGCAGTTTTTATAAAA TGTCGCTCGAGAAGCATTATAAAAATATCAAACCCTGCCTCTTAGTGAAAGAATTGCTGCTGGTGGATGGGCATGTCCCC AACGATATCAAGTTCCACTGTTTTAACCGCCAGGGAGAGATGCACATCTTTATTCAAGTCTATTATGACCGTTTCGGCGT GCACCGTCGGGACGTTTTCGATGAGAACTGGCAGCGCACCGATATTCGCATGGGGTTACAAAACAGTCCGGTGCCAATGG GGAGACCCAAACATCTCGCGCTGATGATCTCGCTTGCCAAACAGATCGCGAAAGATTTTTCTTATCTGCGCATCGATTTT TATGAGGCCAACGACAAAGAATTGACCTTTACCCCCGGCGGCGGACTGTACCGTATCTATCCGGAGGAAATACAGCATAA ATGGGATAGCTTCTTCATTGATTAA
Upstream 100 bases:
>100_bases CTCTTCATACTCAACGCCTTCTTTAGAAAAGGCCTTATTACCAGCCAGATATTATTTTCCTACAAGAGTATACCTTTGTT AATTTCTGAGGTTAAACATT
Downstream 100 bases:
>100_bases ATAGGCCACCCGACATGCGCTAACACGCAATGGCCCCCTATGCTTGGCGTATTCGCCAAGGAACCGCATAGCCTGCTGAT GGTTATAGTAGCGGTCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; O Antigen Biosynthesis Protein; Conserved Protein; Sugar Transferase; Polysaccharide Biosynthesis Protein; Probably Glycosyltransferase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLNPIAKFLLDLLHHQLKYSRVLKKWPNLIHPTTFSEKITLRNLWPKSIYTDLTDKHKVRKYIASTIGEKYLINLYCRCD ELTEDIFDSLPTSFVIKANHSSGFNQVVYDKLSITFVELSGTTRFWTKSSFYKMSLEKHYKNIKPCLLVKELLLVDGHVP NDIKFHCFNRQGEMHIFIQVYYDRFGVHRRDVFDENWQRTDIRMGLQNSPVPMGRPKHLALMISLAKQIAKDFSYLRIDF YEANDKELTFTPGGGLYRIYPEEIQHKWDSFFID
Sequences:
>Translated_274_residues MLNPIAKFLLDLLHHQLKYSRVLKKWPNLIHPTTFSEKITLRNLWPKSIYTDLTDKHKVRKYIASTIGEKYLINLYCRCD ELTEDIFDSLPTSFVIKANHSSGFNQVVYDKLSITFVELSGTTRFWTKSSFYKMSLEKHYKNIKPCLLVKELLLVDGHVP NDIKFHCFNRQGEMHIFIQVYYDRFGVHRRDVFDENWQRTDIRMGLQNSPVPMGRPKHLALMISLAKQIAKDFSYLRIDF YEANDKELTFTPGGGLYRIYPEEIQHKWDSFFID >Mature_274_residues MLNPIAKFLLDLLHHQLKYSRVLKKWPNLIHPTTFSEKITLRNLWPKSIYTDLTDKHKVRKYIASTIGEKYLINLYCRCD ELTEDIFDSLPTSFVIKANHSSGFNQVVYDKLSITFVELSGTTRFWTKSSFYKMSLEKHYKNIKPCLLVKELLLVDGHVP NDIKFHCFNRQGEMHIFIQVYYDRFGVHRRDVFDENWQRTDIRMGLQNSPVPMGRPKHLALMISLAKQIAKDFSYLRIDF YEANDKELTFTPGGGLYRIYPEEIQHKWDSFFID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32483; Mature: 32483
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPIAKFLLDLLHHQLKYSRVLKKWPNLIHPTTFSEKITLRNLWPKSIYTDLTDKHKVR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHCCCHHHHHH KYIASTIGEKYLINLYCRCDELTEDIFDSLPTSFVIKANHSSGFNQVVYDKLSITFVELS HHHHHHCCCCEEEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHHHEEEEEEEEEEEC GTTRFWTKSSFYKMSLEKHYKNIKPCLLVKELLLVDGHVPNDIKFHCFNRQGEMHIFIQV CCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE YYDRFGVHRRDVFDENWQRTDIRMGLQNSPVPMGRPKHLALMISLAKQIAKDFSYLRIDF EEHHHCCCHHHHCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE YEANDKELTFTPGGGLYRIYPEEIQHKWDSFFID EECCCCEEEECCCCCEEEECHHHHHHHHHHHCCC >Mature Secondary Structure MLNPIAKFLLDLLHHQLKYSRVLKKWPNLIHPTTFSEKITLRNLWPKSIYTDLTDKHKVR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHCCCHHHHHH KYIASTIGEKYLINLYCRCDELTEDIFDSLPTSFVIKANHSSGFNQVVYDKLSITFVELS HHHHHHCCCCEEEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHHHEEEEEEEEEEEC GTTRFWTKSSFYKMSLEKHYKNIKPCLLVKELLLVDGHVPNDIKFHCFNRQGEMHIFIQV CCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE YYDRFGVHRRDVFDENWQRTDIRMGLQNSPVPMGRPKHLALMISLAKQIAKDFSYLRIDF EEHHHCCCHHHHCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE YEANDKELTFTPGGGLYRIYPEEIQHKWDSFFID EECCCCEEEECCCCCEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA