| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059215
Identifier: 85059215
GI number: 85059215
Start: 2085265
End: 2085912
Strand: Reverse
Name: 85059215
Synonym: SG1237
Alternate gene names: NA
Gene position: 2085912-2085265 (Counterclockwise)
Preceding gene: 85059217
Following gene: 85059213
Centisome position: 50.01
GC content: 49.38
Gene sequence:
>648_bases ATGACCGCATTATCTATCACACCATTCACTTTTGAAGATCACCTGGTGCGCACCGTCGTCATTAACGATGAGCCGTGGTT CTTTGCTGTAGATGTATACAGCGCCCTTGATATTCAAAACCCCTCTAAAGCCTTGAAAATACTGGATAGCAATGAACGGT CTAACTTTAAGTTAGGGCGTCAGGGAGATGCGAACATCATATCCGAGTCCGGCATGTTCACCTTGGTATTACGCTGCCGT TACGCTGTGAAGCAAGACACCCTGCCCCATCGCTTTCGCAAATGGGTGACGAGTGAAGTCCTTCCCTCAATCCGCAAGAC CGGCAAGTACGAGCATCGCGTTTATAAACCCGAATCCCACGAACTTTTCACCGCTAACGATGCCTCCAATCTCGCCCGTC TGATTTGGCACATGAGCCACAACTTCCGCTTCAAGCAAGCATGGAGCAATGGCATATGGTATAATTTACGAGAAGTCACA GGCATTCCCTCACCTCATCCAATGGAAGTCCGCCACATCCCGCATATTACCAGAGAATGCGAACGTATATGGGCTGTGAT TGAACGTCTGCAATCTGCTATGGTGGAAGCTGAAAGGCGAACCATTCGGCAACTGGTGCGCAAGCGGGAGAATGTGGATA TGCTGTAG
Upstream 100 bases:
>100_bases GTTGGTTTATCCGGTTGTGACAACCCTGTCTGGGCTACCACCAATGAGATTGTCACCTCGGGTTTATAGCGAGTACCGCT ATAAACCACTGGAGGTCATT
Downstream 100 bases:
>100_bases CTCGTGACTTTCTGGAAGTGCATCTACCACCTCATCTGCGTGAGCGCTGCGATTTCAGCACCCTGGCAATGGAGTCCGGC AGCTTTATCGAAGACGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: BRO Domain-Containing Protein; BRO Family Protein; Antirepressor N; Phage Protein; Phage Associated-Antirepressor; Phage-Encoded Protein; Phage Associated Protein; Antirepressor; APSE-2 Prophage; BRO Family N-Terminal Domain Protein; Phage Antirepressor; Phage-Like Protein; Phage Associated-Antirepressor BRO; BRO Domain Protein; BRO-Like Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTALSITPFTFEDHLVRTVVINDEPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGRQGDANIISESGMFTLVLRCR YAVKQDTLPHRFRKWVTSEVLPSIRKTGKYEHRVYKPESHELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYNLREVT GIPSPHPMEVRHIPHITRECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDML
Sequences:
>Translated_215_residues MTALSITPFTFEDHLVRTVVINDEPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGRQGDANIISESGMFTLVLRCR YAVKQDTLPHRFRKWVTSEVLPSIRKTGKYEHRVYKPESHELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYNLREVT GIPSPHPMEVRHIPHITRECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDML >Mature_214_residues TALSITPFTFEDHLVRTVVINDEPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGRQGDANIISESGMFTLVLRCRY AVKQDTLPHRFRKWVTSEVLPSIRKTGKYEHRVYKPESHELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYNLREVTG IPSPHPMEVRHIPHITRECERIWAVIERLQSAMVEAERRTIRQLVRKRENVDML
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25302; Mature: 25171
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00436 PEROXIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSITPFTFEDHLVRTVVINDEPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGR CCCEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCC QGDANIISESGMFTLVLRCRYAVKQDTLPHRFRKWVTSEVLPSIRKTGKYEHRVYKPESH CCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC ELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYNLREVTGIPSPHPMEVRHIPHITREC CEEECCCHHHHHHHHHHHHCCCEEEHHHCCCCEEEHHHHCCCCCCCCCCCHHCCHHHHHH ERIWAVIERLQSAMVEAERRTIRQLVRKRENVDML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TALSITPFTFEDHLVRTVVINDEPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGR CCEECCCCCCCCCEEEEEEECCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCC QGDANIISESGMFTLVLRCRYAVKQDTLPHRFRKWVTSEVLPSIRKTGKYEHRVYKPESH CCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC ELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYNLREVTGIPSPHPMEVRHIPHITREC CEEECCCHHHHHHHHHHHHCCCEEEHHHCCCCEEEHHHHCCCCCCCCCCCHHCCHHHHHH ERIWAVIERLQSAMVEAERRTIRQLVRKRENVDML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA