| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059201
Identifier: 85059201
GI number: 85059201
Start: 2060323
End: 2060994
Strand: Reverse
Name: 85059201
Synonym: SG1223
Alternate gene names: NA
Gene position: 2060994-2060323 (Counterclockwise)
Preceding gene: 85059202
Following gene: 85059200
Centisome position: 49.41
GC content: 41.67
Gene sequence:
>672_bases ATGAGTATAGAAACATTAGTGTTGGGAAAATCAGGTAGCAGTAAATCTACCAGCCTGAGAAATCTTGACCCGGAAAAATT ACTCCTTATCCAATGCATAAGTAAACCTTTACCTTTCAGGTCTTCCGATTGGAAATTATGCACTAACGCCCAGGATGGAG GGAATCGAATCAGAACTGACAACTCAACAAAGATAGAGCAAATACTGAAAAAATCACCACATGAAATCGTTGTTATTGAC GACTATCAATCAGTATTGGTCAATGAGCTAATGAATCGCTCCAGTGAACGGGGTTACGATAAATTTACTGATATCGGGAA AAACGCTTGGTCGATATTCAATACTGCCGGAGCGCTGGATGAACATCGCAGAGTTTATATCCTAGCTCATACTCAAACGG ACGACTTCGGTAACATTAGAATGAAAACAGTGGGAAAAATGGTTGACCAGACAATTGTCCCAGAGGGTTATTTCACCATT GTATTGCGGGCCGTTGTCAATAACGGTAATTACCGCTTCTCGACGCAAACCAACGGGCAGGACTGCTGCAAGAGTTCTAT GGGCATATTTAGCGAAACCCTGGTAGACAATGACCTTAAAGCCATTGATGACGCTATCTGCTCTTACTACGGCATCAACA ACATCCAAATGATTAAGGAAAAAACAGCATGA
Upstream 100 bases:
>100_bases TGAAGCGAAGAAAGAATCGCTGCATTATGCACACACAAAAAAGCTAAACATCAAATACTTAATGCCAAACGGTAACTAAC TAACCTTTTTAAGGTGAACA
Downstream 100 bases:
>100_bases ATAACGTGACATTCATTTACAATCAGGAAGCAGCACTGGCCGCCGGTCAAAGCGGATTTATCACTGAATCTGGCGCTTAT GTCGTCACCATTCTGGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSIETLVLGKSGSSKSTSLRNLDPEKLLLIQCISKPLPFRSSDWKLCTNAQDGGNRIRTDNSTKIEQILKKSPHEIVVID DYQSVLVNELMNRSSERGYDKFTDIGKNAWSIFNTAGALDEHRRVYILAHTQTDDFGNIRMKTVGKMVDQTIVPEGYFTI VLRAVVNNGNYRFSTQTNGQDCCKSSMGIFSETLVDNDLKAIDDAICSYYGINNIQMIKEKTA
Sequences:
>Translated_223_residues MSIETLVLGKSGSSKSTSLRNLDPEKLLLIQCISKPLPFRSSDWKLCTNAQDGGNRIRTDNSTKIEQILKKSPHEIVVID DYQSVLVNELMNRSSERGYDKFTDIGKNAWSIFNTAGALDEHRRVYILAHTQTDDFGNIRMKTVGKMVDQTIVPEGYFTI VLRAVVNNGNYRFSTQTNGQDCCKSSMGIFSETLVDNDLKAIDDAICSYYGINNIQMIKEKTA >Mature_222_residues SIETLVLGKSGSSKSTSLRNLDPEKLLLIQCISKPLPFRSSDWKLCTNAQDGGNRIRTDNSTKIEQILKKSPHEIVVIDD YQSVLVNELMNRSSERGYDKFTDIGKNAWSIFNTAGALDEHRRVYILAHTQTDDFGNIRMKTVGKMVDQTIVPEGYFTIV LRAVVNNGNYRFSTQTNGQDCCKSSMGIFSETLVDNDLKAIDDAICSYYGINNIQMIKEKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25032; Mature: 24901
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIETLVLGKSGSSKSTSLRNLDPEKLLLIQCISKPLPFRSSDWKLCTNAQDGGNRIRTD CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEECCC NSTKIEQILKKSPHEIVVIDDYQSVLVNELMNRSSERGYDKFTDIGKNAWSIFNTAGALD CCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCC EHRRVYILAHTQTDDFGNIRMKTVGKMVDQTIVPEGYFTIVLRAVVNNGNYRFSTQTNGQ CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHH DCCKSSMGIFSETLVDNDLKAIDDAICSYYGINNIQMIKEKTA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHEECCC >Mature Secondary Structure SIETLVLGKSGSSKSTSLRNLDPEKLLLIQCISKPLPFRSSDWKLCTNAQDGGNRIRTD CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEECCC NSTKIEQILKKSPHEIVVIDDYQSVLVNELMNRSSERGYDKFTDIGKNAWSIFNTAGALD CCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCC EHRRVYILAHTQTDDFGNIRMKTVGKMVDQTIVPEGYFTIVLRAVVNNGNYRFSTQTNGQ CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHH DCCKSSMGIFSETLVDNDLKAIDDAICSYYGINNIQMIKEKTA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA