| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059200
Identifier: 85059200
GI number: 85059200
Start: 2059745
End: 2060326
Strand: Reverse
Name: 85059200
Synonym: SG1222
Alternate gene names: NA
Gene position: 2060326-2059745 (Counterclockwise)
Preceding gene: 85059201
Following gene: 85059199
Centisome position: 49.39
GC content: 44.16
Gene sequence:
>582_bases ATGAATAACGTGACATTCATTTACAATCAGGAAGCAGCACTGGCCGCCGGTCAAAGCGGATTTATCACTGAATCTGGCGC TTATGTCGTCACCATTCTGGAAGCAAAGTATATGACCAGCCAGAGCGGCGCAGAATCCATTGAGTTTTCAGTTGAAAACG AAGACGGAAAGAAAGCAAATTACATTAATATCTATTGCCAGAAAAAAGACAAAACACCGAATAAATATGGTATCAATATG ATTAATGCCATTATGGGTTGTATTGGTGTTCAGCAGCTCACTACCAAAATGATTGATGCCCATACGCATCTGGCACCAGA GCTTACCGGTCAACGTATTGGACTAGTACTGCAAAAGATGTTGAAAACCAAGTCAGACGGCAAGGAAACGCACAGCCTTG ATATTATGCTTCCTTTTGCGGCTCAGACGCGTCAAACACTGGAGAAGAAAATAAAGAATCTTCCCGCACAGGCTATCGAT AAGCAAGTTGCAACGCTACAAGATAAGGACGAGCGCAAACAATCACCGCGTGGCTATGAGCAACAGGAAACATCCGCCCC GGATTCAGACATCCCCTTCTAA
Upstream 100 bases:
>100_bases TTAGCGAAACCCTGGTAGACAATGACCTTAAAGCCATTGATGACGCTATCTGCTCTTACTACGGCATCAACAACATCCAA ATGATTAAGGAAAAAACAGC
Downstream 100 bases:
>100_bases ATCTATTCATTAACGCAATTCATGGCTGACCCCCGGTCAGGGAGTCGGCTATCTGCAATACAGGAGTTCAGCATGGACAA GAATGCTAATCTTATGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNNVTFIYNQEAALAAGQSGFITESGAYVVTILEAKYMTSQSGAESIEFSVENEDGKKANYINIYCQKKDKTPNKYGINM INAIMGCIGVQQLTTKMIDAHTHLAPELTGQRIGLVLQKMLKTKSDGKETHSLDIMLPFAAQTRQTLEKKIKNLPAQAID KQVATLQDKDERKQSPRGYEQQETSAPDSDIPF
Sequences:
>Translated_193_residues MNNVTFIYNQEAALAAGQSGFITESGAYVVTILEAKYMTSQSGAESIEFSVENEDGKKANYINIYCQKKDKTPNKYGINM INAIMGCIGVQQLTTKMIDAHTHLAPELTGQRIGLVLQKMLKTKSDGKETHSLDIMLPFAAQTRQTLEKKIKNLPAQAID KQVATLQDKDERKQSPRGYEQQETSAPDSDIPF >Mature_193_residues MNNVTFIYNQEAALAAGQSGFITESGAYVVTILEAKYMTSQSGAESIEFSVENEDGKKANYINIYCQKKDKTPNKYGINM INAIMGCIGVQQLTTKMIDAHTHLAPELTGQRIGLVLQKMLKTKSDGKETHSLDIMLPFAAQTRQTLEKKIKNLPAQAID KQVATLQDKDERKQSPRGYEQQETSAPDSDIPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21408; Mature: 21408
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVTFIYNQEAALAAGQSGFITESGAYVVTILEAKYMTSQSGAESIEFSVENEDGKKAN CCCEEEEECCCHHHHCCCCCCEECCCCEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCC YINIYCQKKDKTPNKYGINMINAIMGCIGVQQLTTKMIDAHTHLAPELTGQRIGLVLQKM EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHH LKTKSDGKETHSLDIMLPFAAQTRQTLEKKIKNLPAQAIDKQVATLQDKDERKQSPRGYE HHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCC QQETSAPDSDIPF CHHCCCCCCCCCC >Mature Secondary Structure MNNVTFIYNQEAALAAGQSGFITESGAYVVTILEAKYMTSQSGAESIEFSVENEDGKKAN CCCEEEEECCCHHHHCCCCCCEECCCCEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCC YINIYCQKKDKTPNKYGINMINAIMGCIGVQQLTTKMIDAHTHLAPELTGQRIGLVLQKM EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHH LKTKSDGKETHSLDIMLPFAAQTRQTLEKKIKNLPAQAIDKQVATLQDKDERKQSPRGYE HHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCC QQETSAPDSDIPF CHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA