| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059175
Identifier: 85059175
GI number: 85059175
Start: 2007642
End: 2008721
Strand: Reverse
Name: 85059175
Synonym: SG1197
Alternate gene names: NA
Gene position: 2008721-2007642 (Counterclockwise)
Preceding gene: 85059178
Following gene: 85059162
Centisome position: 48.16
GC content: 32.96
Gene sequence:
>1080_bases ATGCTAGGTATTATTAGATTTTTTCTTGCGACGTGTGTAATTTTATTTCATTTATCAGGAAAATTCCCTAATTTTGGACT GTATGCCGTAAATTGTTTTTATGTCATAAGCGGTTATCTGATTACCATGATTCTTAATACAACTTACAATTTCAAGTTGA TACCATTTACAACAAATAGATTCTTACGCCTTTTCCCTTCCTACTGGCTTGCCTGCATCACAGGCATTATATGTATTTAT TTTATTGATAATCCTAAAGATTTTCATCTGTCCTATGGCCTTCATATATCAGTTAAAGAGTTCCTTGCTAACTTATTGTT AATACCTTGGGCTTTTTTATCTGATAAAATTATTATTTCACCTTTTTATGCTTTTGCAACTCCTGAATTTTTAGATTTTA AAGGATACATGTTCAGGGCAGTAACATCATCATGGTCCGTTGCTGTCGAAATTACATGCTATTTTTTACTTTGGTGCTTT GTGGCTAGAGGATATAAAAGGACATTATTAGCAATACTTGCTAGCAGCATTTATCATTGGTATGCAATAAGTGTTAGCGA CAACATCATAACAACCTATTCTCCCTTTTTAGCCGCAATGCTTCCCTTTAGCATAGGTGCTCTAGGTTACTTTTTATCCC ATTCAATAGAAAAGAAAAATAAAGATTTAATCAAACCTACGCGATATCAAATATTTTCTCTTTTCCTTTTCTCATTTTTG TTTATTACCAATTGGTATATTGGATGGCAGCGTAACGAGGCATTCGCATCATTTCACTACTATTTCAACAACATCATTGC TTTTGGAGCAGTTGTAGCATTGCATGGAACAAAGTTATCAGGCAAAATTTCAAAACTAGCTAAGTTCTTGGGAGATCTTT CATACCCTATATTTCTTTGTCATTTTTTTATAGGTCTTGTAGTATGGCAAATAAGTGGACAACCAACGGAAAATCGCGGA TGGATAATATTTTTTATTGGATATGGTCTATCTGTAATTTGGGGACTACTCTCAATATTACTTATAGATAGACCAATATC TAAAATTAGAGATTTAATAAGAGCACGAGCCAATTTGTGA
Upstream 100 bases:
>100_bases AAAAAGGAAAAGTATCAACTATGGTGGCGTGGTGGTATTGCTGCTGTGTGTTAATTCGTGCCATAATGTAAAGTAAGAGT ATTTCTATACGGTAAAAAAT
Downstream 100 bases:
>100_bases TGTTTTGCTAAACTTTAATTTGTGATTCCAGAGCATCGATACGAGCCTCTAGTCCACGAACAATGAATAGTGCAAGCTGG TCATGCCGAAAGCTATAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MLGIIRFFLATCVILFHLSGKFPNFGLYAVNCFYVISGYLITMILNTTYNFKLIPFTTNRFLRLFPSYWLACITGIICIY FIDNPKDFHLSYGLHISVKEFLANLLLIPWAFLSDKIIISPFYAFATPEFLDFKGYMFRAVTSSWSVAVEITCYFLLWCF VARGYKRTLLAILASSIYHWYAISVSDNIITTYSPFLAAMLPFSIGALGYFLSHSIEKKNKDLIKPTRYQIFSLFLFSFL FITNWYIGWQRNEAFASFHYYFNNIIAFGAVVALHGTKLSGKISKLAKFLGDLSYPIFLCHFFIGLVVWQISGQPTENRG WIIFFIGYGLSVIWGLLSILLIDRPISKIRDLIRARANL
Sequences:
>Translated_359_residues MLGIIRFFLATCVILFHLSGKFPNFGLYAVNCFYVISGYLITMILNTTYNFKLIPFTTNRFLRLFPSYWLACITGIICIY FIDNPKDFHLSYGLHISVKEFLANLLLIPWAFLSDKIIISPFYAFATPEFLDFKGYMFRAVTSSWSVAVEITCYFLLWCF VARGYKRTLLAILASSIYHWYAISVSDNIITTYSPFLAAMLPFSIGALGYFLSHSIEKKNKDLIKPTRYQIFSLFLFSFL FITNWYIGWQRNEAFASFHYYFNNIIAFGAVVALHGTKLSGKISKLAKFLGDLSYPIFLCHFFIGLVVWQISGQPTENRG WIIFFIGYGLSVIWGLLSILLIDRPISKIRDLIRARANL >Mature_359_residues MLGIIRFFLATCVILFHLSGKFPNFGLYAVNCFYVISGYLITMILNTTYNFKLIPFTTNRFLRLFPSYWLACITGIICIY FIDNPKDFHLSYGLHISVKEFLANLLLIPWAFLSDKIIISPFYAFATPEFLDFKGYMFRAVTSSWSVAVEITCYFLLWCF VARGYKRTLLAILASSIYHWYAISVSDNIITTYSPFLAAMLPFSIGALGYFLSHSIEKKNKDLIKPTRYQIFSLFLFSFL FITNWYIGWQRNEAFASFHYYFNNIIAFGAVVALHGTKLSGKISKLAKFLGDLSYPIFLCHFFIGLVVWQISGQPTENRG WIIFFIGYGLSVIWGLLSILLIDRPISKIRDLIRARANL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41402; Mature: 41402
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIIRFFLATCVILFHLSGKFPNFGLYAVNCFYVISGYLITMILNTTYNFKLIPFTTNR CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH FLRLFPSYWLACITGIICIYFIDNPKDFHLSYGLHISVKEFLANLLLIPWAFLSDKIIIS HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEE PFYAFATPEFLDFKGYMFRAVTSSWSVAVEITCYFLLWCFVARGYKRTLLAILASSIYHW CHHHHCCCCHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHE YAISVSDNIITTYSPFLAAMLPFSIGALGYFLSHSIEKKNKDLIKPTRYQIFSLFLFSFL EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FITNWYIGWQRNEAFASFHYYFNNIIAFGAVVALHGTKLSGKISKLAKFLGDLSYPIFLC HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH HFFIGLVVWQISGQPTENRGWIIFFIGYGLSVIWGLLSILLIDRPISKIRDLIRARANL HHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLGIIRFFLATCVILFHLSGKFPNFGLYAVNCFYVISGYLITMILNTTYNFKLIPFTTNR CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH FLRLFPSYWLACITGIICIYFIDNPKDFHLSYGLHISVKEFLANLLLIPWAFLSDKIIIS HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEE PFYAFATPEFLDFKGYMFRAVTSSWSVAVEITCYFLLWCFVARGYKRTLLAILASSIYHW CHHHHCCCCHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHE YAISVSDNIITTYSPFLAAMLPFSIGALGYFLSHSIEKKNKDLIKPTRYQIFSLFLFSFL EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FITNWYIGWQRNEAFASFHYYFNNIIAFGAVVALHGTKLSGKISKLAKFLGDLSYPIFLC HHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH HFFIGLVVWQISGQPTENRGWIIFFIGYGLSVIWGLLSILLIDRPISKIRDLIRARANL HHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA