| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059162
Identifier: 85059162
GI number: 85059162
Start: 1987643
End: 1988038
Strand: Reverse
Name: 85059162
Synonym: SG1184
Alternate gene names: NA
Gene position: 1988038-1987643 (Counterclockwise)
Preceding gene: 85059175
Following gene: 85059155
Centisome position: 47.66
GC content: 46.46
Gene sequence:
>396_bases ATGGGCCAAGTCGCATTTGATACATTGAAATTCGTCGAAACGCTTGAGACAGCCGGTTTACCGAAAGATCAGGCTAAGGC AATTTCGCTTGCGGTACGCGAATCGCATGAAGCGGCCGACGTTGCTACAAAGCGCGATCTTGAAGATGCTAAAAAAGACG TTTTATCCGAAGTTACAGCCGTCAAGCGCGATCTTGAAGATGTACGTAAAGAGATTGAGTTTCGCTTTGAAAAGACCGAC ACCCAAATCGCCGATGCCAGAAAAGAAACGGCGACACAGATAGCCCTTTTGCGTAAGGACGTTGAAAGCATATCAACGTG GTTGCTCATTAAGATGGCTGCCATGATGACGGCACTTCTTGGAATTGCGGTCACACTCGTCAAAATTCTCATTTAA
Upstream 100 bases:
>100_bases CGTGGTGATTATAGCAAATTCTCTGTGGCATCGTTGGCGCAAAGTTGCCTTGCCACGCCCCTGACAGCTATACTGCCTGC ATCACCAAGAGGATACGCAC
Downstream 100 bases:
>100_bases CCTTCTCAACAACCCACGCCCAACCCCAAATTATCTTCAGAACGGGATTGAATCCTCGTACGCATCGACGGGCGGTATGC CTTGAGATGGATAACCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAADVATKRDLEDAKKDVLSEVTAVKRDLEDVRKEIEFRFEKTD TQIADARKETATQIALLRKDVESISTWLLIKMAAMMTALLGIAVTLVKILI
Sequences:
>Translated_131_residues MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAADVATKRDLEDAKKDVLSEVTAVKRDLEDVRKEIEFRFEKTD TQIADARKETATQIALLRKDVESISTWLLIKMAAMMTALLGIAVTLVKILI >Mature_130_residues GQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAADVATKRDLEDAKKDVLSEVTAVKRDLEDVRKEIEFRFEKTDT QIADARKETATQIALLRKDVESISTWLLIKMAAMMTALLGIAVTLVKILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14545; Mature: 14414
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAADVATKRDLEDAKKDVLSEVTA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKRDLEDVRKEIEFRFEKTDTQIADARKETATQIALLRKDVESISTWLLIKMAAMMTALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAVTLVKILI HHHHHHHHHHC >Mature Secondary Structure GQVAFDTLKFVETLETAGLPKDQAKAISLAVRESHEAADVATKRDLEDAKKDVLSEVTA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKRDLEDVRKEIEFRFEKTDTQIADARKETATQIALLRKDVESISTWLLIKMAAMMTALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAVTLVKILI HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA