| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is hisA
Identifier: 85059103
GI number: 85059103
Start: 1867879
End: 1868619
Strand: Reverse
Name: hisA
Synonym: SG1125
Alternate gene names: 85059103
Gene position: 1868619-1867879 (Counterclockwise)
Preceding gene: 85059104
Following gene: 85059102
Centisome position: 44.8
GC content: 64.51
Gene sequence:
>741_bases GTGATTATACCCGCTTTGGATTTGATTGATGGAGCCGTCGTGCGGCTCCATCAGGGCGATTATCAGACACAATGCCACTA CGGCGCCGATCCGCTGCCGCGGCTGCAAGATTACCTGCGCCAGGGCGCCGAGGTGCTACATCTGGTGGATTTGACCGGCG CCCGCGATCCGCAAACGCGCCAAATCCCGCTGTTGCGCCGGCTGCTGGCCGGGGTGGCGCCAGCGCTAGTGCAGGTCGGC GGCGGTATCCGCAGCGCGGCGGATGTCGAGGTGCTGCTGGAGGCTGGCGCCACCCGTGTGGTGGTCGGCTCTACCGCGGT ACTCCAGCCGCAGGAGGTACAGCGCTGGTTTGAACGTTTCGGCCCTGACGCGCTGGTGCTGGCGCTGGACGTGCGCATCG ACGACGACGGCCAGCGCCGGGTGGCGATAAGCGGCTGGCAGGAAGACTCCGGCGCGACACTTGAACAGGTGATAACGCAG TATCGCCCGCTCGGGCTTAAACATGTGCTGTGTACCGATATCTCCCGCGACGGCACGCTGACGGGCAGCAATGTGTCTCT GTATCGCTCGCTGTGCGACGCCTGGTCCGATATCGCTTTCCAATCTTCCGGCGGCATCGGCAGCCTGGCGGACATCGCCC AGCTTCGCCACAGCGGCGTGCAGGGCGTCATCGTCGGCCGCTCGCTGTTGGAAAACAAATTCACCGTGGCGGAGGCGCTG GCATGCTGGCAAAACGCATAA
Upstream 100 bases:
>100_bases CGCGGTGGAGCAGGATAATTTCTTCGGCGTGCAGTTTCACCCGGAGCGCTCCGGCGCCGCCGGCCGCCAGCTGCTGAAAA ATTTTTTGGAGATGTAACCG
Downstream 100 bases:
>100_bases TTCCCTGTCTGGATGTCCGGCAGGGCCAGGTGGTAAAAGGGGTGCAATTCCGAAATCACGAAATCATCGGCGGTATTGTG CCGCTGGTGTGCCGCTATGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MIIPALDLIDGAVVRLHQGDYQTQCHYGADPLPRLQDYLRQGAEVLHLVDLTGARDPQTRQIPLLRRLLAGVAPALVQVG GGIRSAADVEVLLEAGATRVVVGSTAVLQPQEVQRWFERFGPDALVLALDVRIDDDGQRRVAISGWQEDSGATLEQVITQ YRPLGLKHVLCTDISRDGTLTGSNVSLYRSLCDAWSDIAFQSSGGIGSLADIAQLRHSGVQGVIVGRSLLENKFTVAEAL ACWQNA
Sequences:
>Translated_246_residues MIIPALDLIDGAVVRLHQGDYQTQCHYGADPLPRLQDYLRQGAEVLHLVDLTGARDPQTRQIPLLRRLLAGVAPALVQVG GGIRSAADVEVLLEAGATRVVVGSTAVLQPQEVQRWFERFGPDALVLALDVRIDDDGQRRVAISGWQEDSGATLEQVITQ YRPLGLKHVLCTDISRDGTLTGSNVSLYRSLCDAWSDIAFQSSGGIGSLADIAQLRHSGVQGVIVGRSLLENKFTVAEAL ACWQNA >Mature_246_residues MIIPALDLIDGAVVRLHQGDYQTQCHYGADPLPRLQDYLRQGAEVLHLVDLTGARDPQTRQIPLLRRLLAGVAPALVQVG GGIRSAADVEVLLEAGATRVVVGSTAVLQPQEVQRWFERFGPDALVLALDVRIDDDGQRRVAISGWQEDSGATLEQVITQ YRPLGLKHVLCTDISRDGTLTGSNVSLYRSLCDAWSDIAFQSSGGIGSLADIAQLRHSGVQGVIVGRSLLENKFTVAEAL ACWQNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=246, Percent_Identity=71.1382113821138, Blast_Score=350, Evalue=5e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_SODGM (Q2NTX5)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454805.1 - HSSP: P16250 - ProteinModelPortal: Q2NTX5 - SMR: Q2NTX5 - STRING: Q2NTX5 - GeneID: 3867553 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1125 - NMPDR: fig|343509.6.peg.2308 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: Q2NTX5 - ProtClustDB: PRK00748 - BioCyc: SGLO343509:SG1125-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26570; Mature: 26570
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: ACT_SITE 7-7 ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPALDLIDGAVVRLHQGDYQTQCHYGADPLPRLQDYLRQGAEVLHLVDLTGARDPQTR CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHCCCCCCCCCCC QIPLLRRLLAGVAPALVQVGGGIRSAADVEVLLEAGATRVVVGSTAVLQPQEVQRWFERF CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCEECHHHHHHHHHHH GPDALVLALDVRIDDDGQRRVAISGWQEDSGATLEQVITQYRPLGLKHVLCTDISRDGTL CCCEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCC TGSNVSLYRSLCDAWSDIAFQSSGGIGSLADIAQLRHSGVQGVIVGRSLLENKFTVAEAL CCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH ACWQNA HHHCCC >Mature Secondary Structure MIIPALDLIDGAVVRLHQGDYQTQCHYGADPLPRLQDYLRQGAEVLHLVDLTGARDPQTR CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHCCCCCCCCCCC QIPLLRRLLAGVAPALVQVGGGIRSAADVEVLLEAGATRVVVGSTAVLQPQEVQRWFERF CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCEECHHHHHHHHHHH GPDALVLALDVRIDDDGQRRVAISGWQEDSGATLEQVITQYRPLGLKHVLCTDISRDGTL CCCEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCC TGSNVSLYRSLCDAWSDIAFQSSGGIGSLADIAQLRHSGVQGVIVGRSLLENKFTVAEAL CCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH ACWQNA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA