| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058987
Identifier: 85058987
GI number: 85058987
Start: 1665396
End: 1665902
Strand: Reverse
Name: 85058987
Synonym: SG1009
Alternate gene names: NA
Gene position: 1665902-1665396 (Counterclockwise)
Preceding gene: 85058988
Following gene: 85058985
Centisome position: 39.94
GC content: 56.41
Gene sequence:
>507_bases ATGGCTCCCCAGGGCTCAATCACCGGCCTCTTCAAATTCGCCGTTTGCATTAAGCACATACCAGGTATCCGGTTTCACGC CGTTGTCGCCAATCCTGCTGGCGCGGATGTGGATAATGTCGCCCTCATCATTGCGGTAGCACAGTACGATTGCGCTGCCC TCAGCGGCTTTAGCCTTACCCTGCGCGCCGAGAGACGCGGCAACCGATCCGATGCCGCTAACGTCTGCCGTCGACCGGTG GCCGGTGTTGGTGGCGGCGGACCCGTCGCCTTCAACGATAGTCCGTTCTGCGGACTTATCAATTTTACTCGCTATGCACT CGACGGCGCGGCCAACCATTTGGTGGAGGGACAGCGCCTTCTTGATGGTAATTGTGCTACTGGCGAGTTTGCTGCCTCTC GCTCCATGGGCGATATCGCCGAATACTTCAACCTCGGCAAAACGATGATTTGCAGGCTCGTCGTAATTAAAGACATCAAG CGGATATTCGCAGGTGTGAAAACCTGA
Upstream 100 bases:
>100_bases GCAATGTAAATTCGCATGATGACCTCTTAATAAGTATTGAATGGGCGTTCGGCTTAACAGGAAATGTTGGTTTAAAGGAA CGCACGACAAGGCGTCGTAA
Downstream 100 bases:
>100_bases ACTATAGATTTCTACCGCGCCGTCGTGATGGTAGGTTTTCCCGATCTCGAACTGATATGATAATCACGGCGAGGCAACTC GTCCGCGTTGCTCACGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAPQGSITGLFKFAVCIKHIPGIRFHAVVANPAGADVDNVALIIAVAQYDCAALSGFSLTLRAERRGNRSDAANVCRRPV AGVGGGGPVAFNDSPFCGLINFTRYALDGAANHLVEGQRLLDGNCATGEFAASRSMGDIAEYFNLGKTMICRLVVIKDIK RIFAGVKT
Sequences:
>Translated_168_residues MAPQGSITGLFKFAVCIKHIPGIRFHAVVANPAGADVDNVALIIAVAQYDCAALSGFSLTLRAERRGNRSDAANVCRRPV AGVGGGGPVAFNDSPFCGLINFTRYALDGAANHLVEGQRLLDGNCATGEFAASRSMGDIAEYFNLGKTMICRLVVIKDIK RIFAGVKT >Mature_167_residues APQGSITGLFKFAVCIKHIPGIRFHAVVANPAGADVDNVALIIAVAQYDCAALSGFSLTLRAERRGNRSDAANVCRRPVA GVGGGGPVAFNDSPFCGLINFTRYALDGAANHLVEGQRLLDGNCATGEFAASRSMGDIAEYFNLGKTMICRLVVIKDIKR IFAGVKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17703; Mature: 17571
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPQGSITGLFKFAVCIKHIPGIRFHAVVANPAGADVDNVALIIAVAQYDCAALSGFSLT CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCHHHHCCCEEE LRAERRGNRSDAANVCRRPVAGVGGGGPVAFNDSPFCGLINFTRYALDGAANHLVEGQRL EEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHH LDGNCATGEFAASRSMGDIAEYFNLGKTMICRLVVIKDIKRIFAGVKT CCCCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure APQGSITGLFKFAVCIKHIPGIRFHAVVANPAGADVDNVALIIAVAQYDCAALSGFSLT CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEHHCCHHHHCCCEEE LRAERRGNRSDAANVCRRPVAGVGGGGPVAFNDSPFCGLINFTRYALDGAANHLVEGQRL EEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHH LDGNCATGEFAASRSMGDIAEYFNLGKTMICRLVVIKDIKRIFAGVKT CCCCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA