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The map label for this gene is amsL [H]

Identifier: 85058954

GI number: 85058954

Start: 1607091

End: 1608236

Strand: Reverse

Name: amsL [H]

Synonym: SG0976

Alternate gene names: 85058954

Gene position: 1608236-1607091 (Counterclockwise)

Preceding gene: 85058955

Following gene: 85058950

Centisome position: 38.56

GC content: 43.37

Gene sequence:

>1146_bases
ATGAGTAGTTATCTTATCCATCGTCAGCAAATTACACGCAAAGAGCAGAGTACCATTTTCTGGGTCAATGCTATGTTAGG
CGCTATGACGGCAGGCTTATTGGTGCTGATGGCTTACCCTTTAGCGTTATTCTATAAAATCCCGGAATTAACTGGATTGA
TCGCTTTGACCAGCCTTAACTTTCTTATTCTTGGAGGCCTATCCCAGTATCAAGCTCATTTTATTAAACTCAAAAAAGTT
ATTATTCTTGTACGTATAGAAATGTTCTCTAAACTCATTGCGTTCATGGTGACGGTAGCACTATTATATTTTACGCCATT
ACGTCCAGCCGCCGTCATTCTTGGGTTGTTTACCAATGCGCTGATTAAACTTATCTGTATACTTTATTTCAGTGAGAAGA
CATGGCATCCCACTTTTGAATTCTCAGGTGATAGTTTCAAGGCAGCCTTAAAATATGGTAGCTTTCAATTAGGCTCGCAG
ATTATCAATCAATTTCGTACTCAAGCAGATTCCCTGCTGTTGGCAAAATTCCTGGGCCCGGAAGTGCTCGGGATCTACTC
ACTGGCAAAAGATCTGGTCCTGCAGCCATTAAAATTGCTGACGCCGGTGATTAATCGCTTGGCCCTTCCCCGCTTCGCTG
AAAAACAGAGTTCAGAAAGTGAATTGAAAAAGATTTATCTTAACTCAACATTCGCCATTTGTTCTTCAAGCGCACTGCTT
TTCCTGATCATCGATATTTTTGCACCGACGGTGGTGAGGATCCTCTATGGCGCACACCATGAACAGGTCGCGGTACTGAT
ACCTTATATGCTGTTGCTTGGCGTGCTCAGACCCATGGGAGGCTTGACCGGCGCGATTACCCAGGCGAATGGTAAAACTC
ATATCGAGTTCTATTGGAATATCATTGCCGGCGTCGTGATGCTCGGGATCTTAGCGTTGGCCCTATTGAGCAAAAACATC
CTGGTCATCGCCTCTGCGCTGTCCATTTCGCAAGTGACCATTTCGTTTCTGGTTTACCCCTTTTTCATCAAGCCGATTGT
CGATGTGGGGCTTTTCCCTCATTTACGTAACTGGTTACCGACAACAATTGTCGTCACTTTGATAATTTATCTGATCAATC
ACTATCAACTTTATATTAGCCTTTAA

Upstream 100 bases:

>100_bases
ACTGTCTGTTCTGGCCAGGACGACAGGTGCCAGAGAGCTCGGAATTATCGCAATTATCAATTCTATCCTCGCTATAGCGA
TGGTTTTACAAGATATGGGT

Downstream 100 bases:

>100_bases
CCGAAAAACGCTGCCTGGGGAAGCGTTTTTTTTGCGAGCGACGACACTCTTCTACCACGCGTCCCTAGTGCGATAGCCAA
GCGCCATCGCACTCGTCGTG

Product: amylovoran biosynthesis protein AmsL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSSYLIHRQQITRKEQSTIFWVNAMLGAMTAGLLVLMAYPLALFYKIPELTGLIALTSLNFLILGGLSQYQAHFIKLKKV
IILVRIEMFSKLIAFMVTVALLYFTPLRPAAVILGLFTNALIKLICILYFSEKTWHPTFEFSGDSFKAALKYGSFQLGSQ
IINQFRTQADSLLLAKFLGPEVLGIYSLAKDLVLQPLKLLTPVINRLALPRFAEKQSSESELKKIYLNSTFAICSSSALL
FLIIDIFAPTVVRILYGAHHEQVAVLIPYMLLLGVLRPMGGLTGAITQANGKTHIEFYWNIIAGVVMLGILALALLSKNI
LVIASALSISQVTISFLVYPFFIKPIVDVGLFPHLRNWLPTTIVVTLIIYLINHYQLYISL

Sequences:

>Translated_381_residues
MSSYLIHRQQITRKEQSTIFWVNAMLGAMTAGLLVLMAYPLALFYKIPELTGLIALTSLNFLILGGLSQYQAHFIKLKKV
IILVRIEMFSKLIAFMVTVALLYFTPLRPAAVILGLFTNALIKLICILYFSEKTWHPTFEFSGDSFKAALKYGSFQLGSQ
IINQFRTQADSLLLAKFLGPEVLGIYSLAKDLVLQPLKLLTPVINRLALPRFAEKQSSESELKKIYLNSTFAICSSSALL
FLIIDIFAPTVVRILYGAHHEQVAVLIPYMLLLGVLRPMGGLTGAITQANGKTHIEFYWNIIAGVVMLGILALALLSKNI
LVIASALSISQVTISFLVYPFFIKPIVDVGLFPHLRNWLPTTIVVTLIIYLINHYQLYISL
>Mature_380_residues
SSYLIHRQQITRKEQSTIFWVNAMLGAMTAGLLVLMAYPLALFYKIPELTGLIALTSLNFLILGGLSQYQAHFIKLKKVI
ILVRIEMFSKLIAFMVTVALLYFTPLRPAAVILGLFTNALIKLICILYFSEKTWHPTFEFSGDSFKAALKYGSFQLGSQI
INQFRTQADSLLLAKFLGPEVLGIYSLAKDLVLQPLKLLTPVINRLALPRFAEKQSSESELKKIYLNSTFAICSSSALLF
LIIDIFAPTVVRILYGAHHEQVAVLIPYMLLLGVLRPMGGLTGAITQANGKTHIEFYWNIIAGVVMLGILALALLSKNIL
VIASALSISQVTISFLVYPFFIKPIVDVGLFPHLRNWLPTTIVVTLIIYLINHYQLYISL

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=365, Percent_Identity=26.3013698630137, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 42560; Mature: 42429

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYLIHRQQITRKEQSTIFWVNAMLGAMTAGLLVLMAYPLALFYKIPELTGLIALTSLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLILGGLSQYQAHFIKLKKVIILVRIEMFSKLIAFMVTVALLYFTPLRPAAVILGLFTNA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIKLICILYFSEKTWHPTFEFSGDSFKAALKYGSFQLGSQIINQFRTQADSLLLAKFLGP
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH
EVLGIYSLAKDLVLQPLKLLTPVINRLALPRFAEKQSSESELKKIYLNSTFAICSSSALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCHHHHHCCCHHH
FLIIDIFAPTVVRILYGAHHEQVAVLIPYMLLLGVLRPMGGLTGAITQANGKTHIEFYWN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHH
IIAGVVMLGILALALLSKNILVIASALSISQVTISFLVYPFFIKPIVDVGLFPHLRNWLP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
TTIVVTLIIYLINHYQLYISL
HHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
SSYLIHRQQITRKEQSTIFWVNAMLGAMTAGLLVLMAYPLALFYKIPELTGLIALTSLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLILGGLSQYQAHFIKLKKVIILVRIEMFSKLIAFMVTVALLYFTPLRPAAVILGLFTNA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIKLICILYFSEKTWHPTFEFSGDSFKAALKYGSFQLGSQIINQFRTQADSLLLAKFLGP
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH
EVLGIYSLAKDLVLQPLKLLTPVINRLALPRFAEKQSSESELKKIYLNSTFAICSSSALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCHHHHHCCCHHH
FLIIDIFAPTVVRILYGAHHEQVAVLIPYMLLLGVLRPMGGLTGAITQANGKTHIEFYWN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHH
IIAGVVMLGILALALLSKNILVIASALSISQVTISFLVYPFFIKPIVDVGLFPHLRNWLP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
TTIVVTLIIYLINHYQLYISL
HHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]