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The map label for this gene is yajR [H]

Identifier: 85058640

GI number: 85058640

Start: 1125172

End: 1126533

Strand: Reverse

Name: yajR [H]

Synonym: SG0662

Alternate gene names: 85058640

Gene position: 1126533-1125172 (Counterclockwise)

Preceding gene: 85058641

Following gene: 85058639

Centisome position: 27.01

GC content: 60.72

Gene sequence:

>1362_bases
ATGAACGACACAAAAATGACCGGCATGGAGCTGCGGGCCACCTGGGGCCTGGGTACGGTATTTTCTTTGCGCATGCTGGG
CATGTTCATGGTATTGCCGGTGTTAACCACCTATGGCATGGCGCTACAGGGCGCCAGCGAAGCGCTCATCGGCCTGGCCA
TCGGTATCTACGGGCTGGCGCAGGCGGTGTTTCAGATCCCCTTCGGACTGGTATCCGACCGCGTCGGCCGCAAGCCGCTT
ATCGTCGGTGGTTTGCTGATCTTTGCCCTCGGCAGCGCCATCGCCGCGCTGACCGACAGCATATGGGGCGTGATCCTCGG
CCGCGCGCTACAGGGATCGGGCGCCATTGCCGCCGTGGTGATGGCGCTGCTGTCGGATTTGACCCGCGAGCAGAACCGCA
CCAAAGCGATGGCGTTTATCGGCGTCAGTTTTGGCGTGACCTTTGCCATCGCCATGGTGGTCGGCCCCATCATGACCCAT
GCCATCGGTCTTAGCGGCCTGTTTTGGGGCATCACCGCGCTGGCGTTGGCAGGGGTCGCGCTCACCCTGTTAGTGGTGCC
CACCGCCGGCGCCCATACGCTTAATCGAGAATCAGGCATCGTGCGCGGCAGTTTCGGCAAAGTCCTGGCCAATCCGCAGC
TGCTGAAACTCAACGTGGGGATTTTTTGCCTGCATGCCATGTTGATATCGAGTTTCGTCGCCCTGCCACCCATGATGGCC
CGTGCCGGCTTTTTGCCCGGCGACCAGTGGAAAGTGTACCTGGTCACCATGCTGTTTTCATTCGCCGCGGTGGTGCCGGC
CATCATTTATGCCGAAGTCAAACGGCGCATGAAGCGCGTGTTTCTGGGTTGCGTGACGCTGTTGCTAGTTGCCGAGCTGG
TATTGCTCGCAGCGGGCGGACATCTCTGGGTCATGTTCGCCGGCATTCAAGTGTTCTTTTTGGCGTTCAACGTCATGGAA
GCTATGCTGCCATCGCTTATCAGCAAAGAGTCGCCGGCAGGCTATAAAGGCACCGCTATGGGCGTTTACTCCACCAGCCA
GTTTCTCGGCGTGGCGTTCGGTGGCACGCTCGGCGGCTTTCTGTTTCAACTCCAGGGCGACTGGCTGGTCTTTCTGGCAG
GAGCGGCAATAGCGCTGACGTGGTGGCTTGTAAGCATTACGCTGCGCGAGCCACCCTATGTAAGCAGTCTGCGCATTGCC
CTGCCCGACCGCATGGCGGCCGATGGTCAGTTGGCTCAGCGTCTCCAGGCGCAGCCGGGCGTCACCGAGGTGGTGGTGGT
GCCCGAAGAGCGCAGCGCCTATGTCAAGGTCGATACCAAACAGACCAATCGCGCGGCGCTGGAAAAAACGGTCGCTGCCT
GA

Upstream 100 bases:

>100_bases
TCGCGTATGAGCGATGACGTTAACATCTGTTAAATATCATTCGATTTCCCGTCCTGCGTTATGGCATTACAATAGCCCGG
TAAGATTTTTCGAGGTAGTG

Downstream 100 bases:

>100_bases
GGGCGGCGTGTCCATCCCGACAGGCCCCAATGCCCCCCCTTCGCGCAGCGGTCACCACCTTAGCGCTATCATCACCCTGC
GCCGGCGTGCGTTAGCGCCT

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNDTKMTGMELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLVSDRVGRKPL
IVGGLLIFALGSAIAALTDSIWGVILGRALQGSGAIAAVVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVVGPIMTH
AIGLSGLFWGITALALAGVALTLLVVPTAGAHTLNRESGIVRGSFGKVLANPQLLKLNVGIFCLHAMLISSFVALPPMMA
RAGFLPGDQWKVYLVTMLFSFAAVVPAIIYAEVKRRMKRVFLGCVTLLLVAELVLLAAGGHLWVMFAGIQVFFLAFNVME
AMLPSLISKESPAGYKGTAMGVYSTSQFLGVAFGGTLGGFLFQLQGDWLVFLAGAAIALTWWLVSITLREPPYVSSLRIA
LPDRMAADGQLAQRLQAQPGVTEVVVVPEERSAYVKVDTKQTNRAALEKTVAA

Sequences:

>Translated_453_residues
MNDTKMTGMELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLVSDRVGRKPL
IVGGLLIFALGSAIAALTDSIWGVILGRALQGSGAIAAVVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVVGPIMTH
AIGLSGLFWGITALALAGVALTLLVVPTAGAHTLNRESGIVRGSFGKVLANPQLLKLNVGIFCLHAMLISSFVALPPMMA
RAGFLPGDQWKVYLVTMLFSFAAVVPAIIYAEVKRRMKRVFLGCVTLLLVAELVLLAAGGHLWVMFAGIQVFFLAFNVME
AMLPSLISKESPAGYKGTAMGVYSTSQFLGVAFGGTLGGFLFQLQGDWLVFLAGAAIALTWWLVSITLREPPYVSSLRIA
LPDRMAADGQLAQRLQAQPGVTEVVVVPEERSAYVKVDTKQTNRAALEKTVAA
>Mature_453_residues
MNDTKMTGMELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLAQAVFQIPFGLVSDRVGRKPL
IVGGLLIFALGSAIAALTDSIWGVILGRALQGSGAIAAVVMALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVVGPIMTH
AIGLSGLFWGITALALAGVALTLLVVPTAGAHTLNRESGIVRGSFGKVLANPQLLKLNVGIFCLHAMLISSFVALPPMMA
RAGFLPGDQWKVYLVTMLFSFAAVVPAIIYAEVKRRMKRVFLGCVTLLLVAELVLLAAGGHLWVMFAGIQVFFLAFNVME
AMLPSLISKESPAGYKGTAMGVYSTSQFLGVAFGGTLGGFLFQLQGDWLVFLAGAAIALTWWLVSITLREPPYVSSLRIA
LPDRMAADGQLAQRLQAQPGVTEVVVVPEERSAYVKVDTKQTNRAALEKTVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=454, Percent_Identity=70.0440528634361, Blast_Score=628, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48046; Mature: 48046

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTKMTGMELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLA
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QAVFQIPFGLVSDRVGRKPLIVGGLLIFALGSAIAALTDSIWGVILGRALQGSGAIAAVV
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVVGPIMTHAIGLSGLFWGITALALAGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLVVPTAGAHTLNRESGIVRGSFGKVLANPQLLKLNVGIFCLHAMLISSFVALPPMMA
HHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCHHHH
RAGFLPGDQWKVYLVTMLFSFAAVVPAIIYAEVKRRMKRVFLGCVTLLLVAELVLLAAGG
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HLWVMFAGIQVFFLAFNVMEAMLPSLISKESPAGYKGTAMGVYSTSQFLGVAFGGTLGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
LFQLQGDWLVFLAGAAIALTWWLVSITLREPPYVSSLRIALPDRMAADGQLAQRLQAQPG
HEEECCCEEEEHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCC
VTEVVVVPEERSAYVKVDTKQTNRAALEKTVAA
CEEEEEEECCCCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MNDTKMTGMELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLA
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QAVFQIPFGLVSDRVGRKPLIVGGLLIFALGSAIAALTDSIWGVILGRALQGSGAIAAVV
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVVGPIMTHAIGLSGLFWGITALALAGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLVVPTAGAHTLNRESGIVRGSFGKVLANPQLLKLNVGIFCLHAMLISSFVALPPMMA
HHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCHHHH
RAGFLPGDQWKVYLVTMLFSFAAVVPAIIYAEVKRRMKRVFLGCVTLLLVAELVLLAAGG
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HLWVMFAGIQVFFLAFNVMEAMLPSLISKESPAGYKGTAMGVYSTSQFLGVAFGGTLGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
LFQLQGDWLVFLAGAAIALTWWLVSITLREPPYVSSLRIALPDRMAADGQLAQRLQAQPG
HEEECCCEEEEHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCC
VTEVVVVPEERSAYVKVDTKQTNRAALEKTVAA
CEEEEEEECCCCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]