| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058609
Identifier: 85058609
GI number: 85058609
Start: 1082804
End: 1083505
Strand: Reverse
Name: 85058609
Synonym: SG0631
Alternate gene names: NA
Gene position: 1083505-1082804 (Counterclockwise)
Preceding gene: 85058615
Following gene: 85058608
Centisome position: 25.98
GC content: 53.99
Gene sequence:
>702_bases ATGCAATCTGAAGAACAACGTCTTATCGAAGGCCTGTTTCAACGTCTGAAGCAGGCGGAACAAAACGCAGGCCCTCGCGA TGTCGAGGCGGACCGGCAGATTCAAAGTTTTGTTCAGCAACAACCGGCGGCCCCCTATTACATGGCCCAGTCTATGTTGG TTCAGGAAGCCGCGCTGAACCGGCTGAATCAGCAAGTCCAGCAATTGCAAAACGAAGTGGCGCAGTTGAAGGCGACAGCA CAGCAGCGCCCGGCGGGCGGCGGCTTTCTCAGCGGGTTATTCTGCACGGAGCGTCAGCAACCGTCGGCGTTGCCATGGGG CAATCAACCCTCGCAGCAGCAAGCGGTAGGTTATAGCGGTTATGCACAGCCGTATAACTCCCCGCGCGGCGGAGGGTTTC TTTCCGGCGCGCTGCAAACGGCCGCGGGCGTTGCCGGCGGCGTTGTGCTGGGTAATATGCTCACCAATATGTTCCATCAG TCCGCGCCGCAAGAGATAGTCAATATCATTGACGATCCTGCCGCATCGCTTACTGGCGGCAGCGATCCCCTGCTAAATCA GGATTTCAACGCCGATAATCTGGATAATTTCAATAACGTTTCCAACAGTCATTTTTTCGATCAAAACAGTGATCCGGGCA ACACAGACTATAACGATTTCGGTGATGATGATTTTAGCAACGACGATGATGACTTTATCTGA
Upstream 100 bases:
>100_bases AACCTTTACGCTGGGCGCCTTTCCGCTGCGGCAGGATGGGGCTAAATTTAAGTATAGGCCTCATGGCCCTTCCTACACAT CATTTACGGGAACATCACTT
Downstream 100 bases:
>100_bases CTCCCGCGACGATCGGGCGGGTACGTTTTAGGCCGTAATGCCGGGCCGTGACAATAACCCTTCACGGCCCGGACGGCTAG GTTCTTCGTAATGTAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: yba2 [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MQSEEQRLIEGLFQRLKQAEQNAGPRDVEADRQIQSFVQQQPAAPYYMAQSMLVQEAALNRLNQQVQQLQNEVAQLKATA QQRPAGGGFLSGLFCTERQQPSALPWGNQPSQQQAVGYSGYAQPYNSPRGGGFLSGALQTAAGVAGGVVLGNMLTNMFHQ SAPQEIVNIIDDPAASLTGGSDPLLNQDFNADNLDNFNNVSNSHFFDQNSDPGNTDYNDFGDDDFSNDDDDFI
Sequences:
>Translated_233_residues MQSEEQRLIEGLFQRLKQAEQNAGPRDVEADRQIQSFVQQQPAAPYYMAQSMLVQEAALNRLNQQVQQLQNEVAQLKATA QQRPAGGGFLSGLFCTERQQPSALPWGNQPSQQQAVGYSGYAQPYNSPRGGGFLSGALQTAAGVAGGVVLGNMLTNMFHQ SAPQEIVNIIDDPAASLTGGSDPLLNQDFNADNLDNFNNVSNSHFFDQNSDPGNTDYNDFGDDDFSNDDDDFI >Mature_233_residues MQSEEQRLIEGLFQRLKQAEQNAGPRDVEADRQIQSFVQQQPAAPYYMAQSMLVQEAALNRLNQQVQQLQNEVAQLKATA QQRPAGGGFLSGLFCTERQQPSALPWGNQPSQQQAVGYSGYAQPYNSPRGGGFLSGALQTAAGVAGGVVLGNMLTNMFHQ SAPQEIVNIIDDPAASLTGGSDPLLNQDFNADNLDNFNNVSNSHFFDQNSDPGNTDYNDFGDDDFSNDDDDFI
Specific function: Unknown
COG id: COG3416
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018648 [H]
Pfam domain/function: PF09849 DUF2076 [H]
EC number: NA
Molecular weight: Translated: 25382; Mature: 25382
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSEEQRLIEGLFQRLKQAEQNAGPRDVEADRQIQSFVQQQPAAPYYMAQSMLVQEAALN CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLNQQVQQLQNEVAQLKATAQQRPAGGGFLSGLFCTERQQPSALPWGNQPSQQQAVGYSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC YAQPYNSPRGGGFLSGALQTAAGVAGGVVLGNMLTNMFHQSAPQEIVNIIDDPAASLTGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCC SDPLLNQDFNADNLDNFNNVSNSHFFDQNSDPGNTDYNDFGDDDFSNDDDDFI CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQSEEQRLIEGLFQRLKQAEQNAGPRDVEADRQIQSFVQQQPAAPYYMAQSMLVQEAALN CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLNQQVQQLQNEVAQLKATAQQRPAGGGFLSGLFCTERQQPSALPWGNQPSQQQAVGYSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC YAQPYNSPRGGGFLSGALQTAAGVAGGVVLGNMLTNMFHQSAPQEIVNIIDDPAASLTGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCC SDPLLNQDFNADNLDNFNNVSNSHFFDQNSDPGNTDYNDFGDDDFSNDDDDFI CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]