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The map label for this gene is smp [H]

Identifier: 85058375

GI number: 85058375

Start: 702579

End: 703010

Strand: Reverse

Name: smp [H]

Synonym: SG0397

Alternate gene names: 85058375

Gene position: 703010-702579 (Counterclockwise)

Preceding gene: 85058378

Following gene: 85058367

Centisome position: 16.85

GC content: 60.88

Gene sequence:

>432_bases
ATGGCCCGCGCCAGACTCTCATTCCGTTTGCACCGCACGGTTATCGTGCTGATTTGCGTCGCGCTGCTGGTGGCGTTAAT
GCAGGGCGCGACCTATTTCAGCCTGAGCCACCAAATGGCCCGTTCGGCGCAGGTGGAAGAGTTGGCGGATACGCTGATTC
GCCAGGTTACCGGCGAGCTGGCGCCGCTAATGGCCGGCCGCGACGACAACAGCGCGCCGATCAAACAGGTGCTGGATCGA
TTAACGCAAAACAGCCGCATTCTCGACGCCAGCGTGTACAACATGGACGGCAGTCTGGTGGCCCGCGCCGGCGAAAACAT
CAGCGTACGCGACCGGTTGGCTATCGGCAATCAGCGGGCGGGCAGATTCTTCAACCATCAGCTGTGCGGACGATTGAAGA
TAATAAGGGCCCCAGCGGTTTCGTCCGCCTGA

Upstream 100 bases:

>100_bases
CTATTGGGCATTTTAACTCCTGTAGGAAGATGTTCAACCGCCGTTCTCAACGCGCAACAAGCTATCCTATCGTCGACGAA
TCTGAAGAGAAAGGAAACCT

Downstream 100 bases:

>100_bases
CGCTGGATACCCACTCATTAGAGATCGAAGCCAAACAGGTGGACAATACCACCAATCTGCTGCGCCTGATGATGATGCTG
GCGCTCGCCATCGGTATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MARARLSFRLHRTVIVLICVALLVALMQGATYFSLSHQMARSAQVEELADTLIRQVTGELAPLMAGRDDNSAPIKQVLDR
LTQNSRILDASVYNMDGSLVARAGENISVRDRLAIGNQRAGRFFNHQLCGRLKIIRAPAVSSA

Sequences:

>Translated_143_residues
MARARLSFRLHRTVIVLICVALLVALMQGATYFSLSHQMARSAQVEELADTLIRQVTGELAPLMAGRDDNSAPIKQVLDR
LTQNSRILDASVYNMDGSLVARAGENISVRDRLAIGNQRAGRFFNHQLCGRLKIIRAPAVSSA
>Mature_142_residues
ARARLSFRLHRTVIVLICVALLVALMQGATYFSLSHQMARSAQVEELADTLIRQVTGELAPLMAGRDDNSAPIKQVLDRL
TQNSRILDASVYNMDGSLVARAGENISVRDRLAIGNQRAGRFFNHQLCGRLKIIRAPAVSSA

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family [H]

Homologues:

Organism=Escherichia coli, GI1790847, Length=129, Percent_Identity=57.3643410852713, Blast_Score=152, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019305 [H]

Pfam domain/function: PF10144 SMP_2 [H]

EC number: NA

Molecular weight: Translated: 15702; Mature: 15570

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARARLSFRLHRTVIVLICVALLVALMQGATYFSLSHQMARSAQVEELADTLIRQVTGEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLMAGRDDNSAPIKQVLDRLTQNSRILDASVYNMDGSLVARAGENISVRDRLAIGNQRA
HHHHCCCCCCCCHHHHHHHHHHCCCEEEEHHEECCCCCEEECCCCCCCHHHHHHCCCCCC
GRFFNHQLCGRLKIIRAPAVSSA
CHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
ARARLSFRLHRTVIVLICVALLVALMQGATYFSLSHQMARSAQVEELADTLIRQVTGEL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLMAGRDDNSAPIKQVLDRLTQNSRILDASVYNMDGSLVARAGENISVRDRLAIGNQRA
HHHHCCCCCCCCHHHHHHHHHHCCCEEEEHHEECCCCCEEECCCCCCCHHHHHHCCCCCC
GRFFNHQLCGRLKIIRAPAVSSA
CHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]