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The map label for this gene is rsmC

Identifier: 85058367

GI number: 85058367

Start: 691083

End: 692135

Strand: Reverse

Name: rsmC

Synonym: SG0389

Alternate gene names: 85058367

Gene position: 692135-691083 (Counterclockwise)

Preceding gene: 85058375

Following gene: 85058366

Centisome position: 16.59

GC content: 59.83

Gene sequence:

>1053_bases
ATGTCTGCTTTAATCCCCGCCAGTGAAGTCATACTCCGGCATCAGGATACATTTTCAGATAAACAGGTCGTGATCGCAGG
CGACGTGCAGGATTTGCTGCCGGCCCGGCTTGAGGCGCGGAGTGTTAAGGTGCATACCGCCTGGTTTCACCATCGGCAGA
CGCTGGCGCGCGCGCTAGGCGAGCAGGCGGTGCAATTCGGCCTGGTGGCGGACGCCGCGCTGGGCGGCGGGTGCGACACG
CTGATCTATTACTGGCCGAAAAACAAGCCGGAAGCGCTGTTCCAATTGACCAATCTGCTATCGCTGCTGCCGTTGGGCTG
CGATGTATTTGTGGTGGGGGAAAACCGCAGCGGCGTGCGCAGCGCCGAACCGATGCTGGCAGCCTGGTGCCCGCTGGCTA
AAATCGATAGCGCCCGGCGCTGCGGGCTGTATCACGGCGAGCTTGTTCAGCAGCCCCGTTTCGATGCCGAGGCGTTTTGG
CAATCCTACCAGCTTGAGGATGTGGTGATAAAAACCCTGCCGGGCGTTTTCAGCCGTGACGGGCTAGACAACGGTAGCCA
GTTGCTATTGTCGACGTTTGATCGGCCGTTTCAGGGCCATGTGGCCGACATCGGCTGCGGCACCGGCGTCCTGTCGGCCG
TTCTGGCGAAAGGGGCGGCGGGAGTGCAATTAACGCTCAGTGATGCCCATGCGCCGGCGCTGGCGGCCAGCCGCGCCACC
CTGGCGGTCAATGGGCTGCAGGGAGAGGTGCTGGCCGGCGATGTGTACTCCGCTATCAGCGGTCGCTTCGATATGATTAT
CTCCAACCCGCCGTTCCATGATGGTATGCAAACCAATCTAAAGGCGGCGGAGACGCTGATTCGCGGCGCGCTTAACCATC
TGCGTATCGGTGGCGAATTGCGCATTGTCGCTAACGCCTTTTTGCCCTATCCGGATCTGCTTGATGCAGTATTCGGCAAT
CATCAGGTGCTGGTGCAAAACGGCCGTTTCAAAGTTTATCAGGCTATCCATCAGGTAAAACGCAGCCGCGATAAGGGTCC
TAAACGCCGCTGA

Upstream 100 bases:

>100_bases
GGGCGGCCATGATTCCGCGCCGCTATGCTACCAAACCCATCGAACCCAGGGCAATAAAGCACTATACTCCCTGCTCGATT
TAATGAGGAGCGTTTGTCGC

Downstream 100 bases:

>100_bases
CACAGGCGGTAGCGCGCGGTCATGTGGCGCGGGTCCCGCTGAGCGTGGTATTTTTTTGCAGCAAACGCCCGCGAAATCAC
AAATAATCATTGACCTTAAC

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSALIPASEVILRHQDTFSDKQVVIAGDVQDLLPARLEARSVKVHTAWFHHRQTLARALGEQAVQFGLVADAALGGGCDT
LIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVRSAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFW
QSYQLEDVVIKTLPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRAT
LAVNGLQGEVLAGDVYSAISGRFDMIISNPPFHDGMQTNLKAAETLIRGALNHLRIGGELRIVANAFLPYPDLLDAVFGN
HQVLVQNGRFKVYQAIHQVKRSRDKGPKRR

Sequences:

>Translated_350_residues
MSALIPASEVILRHQDTFSDKQVVIAGDVQDLLPARLEARSVKVHTAWFHHRQTLARALGEQAVQFGLVADAALGGGCDT
LIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVRSAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFW
QSYQLEDVVIKTLPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRAT
LAVNGLQGEVLAGDVYSAISGRFDMIISNPPFHDGMQTNLKAAETLIRGALNHLRIGGELRIVANAFLPYPDLLDAVFGN
HQVLVQNGRFKVYQAIHQVKRSRDKGPKRR
>Mature_349_residues
SALIPASEVILRHQDTFSDKQVVIAGDVQDLLPARLEARSVKVHTAWFHHRQTLARALGEQAVQFGLVADAALGGGCDTL
IYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVRSAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFWQ
SYQLEDVVIKTLPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRATL
AVNGLQGEVLAGDVYSAISGRFDMIISNPPFHDGMQTNLKAAETLIRGALNHLRIGGELRIVANAFLPYPDLLDAVFGNH
QVLVQNGRFKVYQAIHQVKRSRDKGPKRR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=346, Percent_Identity=64.1618497109827, Blast_Score=453, Evalue=1e-129,
Organism=Escherichia coli, GI87082206, Length=187, Percent_Identity=31.0160427807487, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_SODGM (Q2NW11)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454069.1
- ProteinModelPortal:   Q2NW11
- SMR:   Q2NW11
- STRING:   Q2NW11
- GeneID:   3867636
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0389
- NMPDR:   fig|343509.6.peg.918
- eggNOG:   COG2813
- HOGENOM:   HBG296757
- OMA:   TGKFKVY
- PhylomeDB:   Q2NW11
- ProtClustDB:   PRK09489
- BioCyc:   SGLO343509:SG0389-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 37963; Mature: 37832

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALIPASEVILRHQDTFSDKQVVIAGDVQDLLPARLEARSVKVHTAWFHHRQTLARALG
CCCCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH
EQAVQFGLVADAALGGGCDTLIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
SAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFWQSYQLEDVVIKTLPGVFSRD
CCCCHHHHHCCHHHCCCCHHCCCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHCC
GLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRAT
CCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCE
LAVNGLQGEVLAGDVYSAISGRFDMIISNPPFHDGMQTNLKAAETLIRGALNHLRIGGEL
EEEECCCCCEEECHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
RIVANAFLPYPDLLDAVFGNHQVLVQNGRFKVYQAIHQVKRSRDKGPKRR
EEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SALIPASEVILRHQDTFSDKQVVIAGDVQDLLPARLEARSVKVHTAWFHHRQTLARALG
CCCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH
EQAVQFGLVADAALGGGCDTLIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
SAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFWQSYQLEDVVIKTLPGVFSRD
CCCCHHHHHCCHHHCCCCHHCCCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHCC
GLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRAT
CCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCE
LAVNGLQGEVLAGDVYSAISGRFDMIISNPPFHDGMQTNLKAAETLIRGALNHLRIGGEL
EEEECCCCCEEECHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
RIVANAFLPYPDLLDAVFGNHQVLVQNGRFKVYQAIHQVKRSRDKGPKRR
EEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA