| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yhbJ [C]
Identifier: 85058174
GI number: 85058174
Start: 376816
End: 377670
Strand: Reverse
Name: yhbJ [C]
Synonym: SG0196
Alternate gene names: 85058174
Gene position: 377670-376816 (Counterclockwise)
Preceding gene: 85058175
Following gene: 85058173
Centisome position: 9.05
GC content: 57.89
Gene sequence:
>855_bases ATGGTGCTGATGATAGTCAGCGGTCGATCAGGTTCAGGTAAATCCGTTGCGCTGCGCGCGCTGGAGGACATGGGCTTTTA CTGCGTTGATAACCTGCCGGTGGTGTTGCTGCCTCAGTTGGCCAGCGCGCTGGCGGCGAGCAATATCTCCGCTGCGGTGA GCATTGACGTACGCAATATGCCCGAATCGCCGGAGATTTTTGAACAGGCCATGGATAACCTGCCGCAGGCCTTTGCCCCG CAGTTGCTGTTTCTGGACGCCGATCGCAATACCCTCATCCGCCGCTATAGCGACACCCGCCGGCTGCATCCGCTCTCCGC CCTCAACCTATCGCTGGAAAGCGCCATTGATGAAGAGGACTCGCTGCTTGAGCCTCTGCGTTCACGCGCCGATCTGGTGA TCGACACCTCGGAGATGTCGGTGCATGAACTGGCCGAAATGCTGCGTACCCGCATGCTAGGCAAGCGCGAGCGGGAACTG ACCATGGTGTTTGAATCCTTCGGCTACAAGCACGGCATCCCCATCGACGCCGACTACGTGTTCGACGTGCGTTTTCTGCC CAATCCGCACTGGGATCCCAAGCTCAGACCGATGACCGGCCTGGATCGCCCCGTGGCGGCGTTTTTGGATCGCCATACCG AAGTCCATAATTTTATCTATCAAACCCGCAGCTATCTGGAGCTGTGGCTACCGATGCTTGAAACCAATAACCGCAGTTAT CTCACGGTGGCGGTAGGCTGCACCGGCGGCAAACACCGTTCGGTGTATATAGCCGAACAGCTGGCGGACTATTTTCGCTC TCGCGGCAAGAATGCCCAGTCCCGCCACCGCACTCTGGAAAAGAGCAAATCATGA
Upstream 100 bases:
>100_bases GCGACTGACGCCGCGGCGCCGTCCTGAAAGCAGGATAGGTTGGGCGAAGCATGGCCGCATCGCCAGGGGATGAATAAGCA AGGCAGAGGGGTGTATCGTC
Downstream 100 bases:
>100_bases CGGTCAAACAAACGGTAGAGATTAAAAACCGTCTGGGTATGCATGCCCGGCCGGCAATGAAGCTGTTTGAACTGGTACAA AGCTTCGATGCCGAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNMPESPEIFEQAMDNLPQAFAP QLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEEDSLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKREREL TMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS
Sequences:
>Translated_284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNMPESPEIFEQAMDNLPQAFAP QLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEEDSLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKREREL TMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS >Mature_284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNMPESPEIFEQAMDNLPQAFAP QLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEEDSLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKREREL TMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=92.226148409894, Blast_Score=545, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 32214; Mature: 32214
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNM CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCC PESPEIFEQAMDNLPQAFAPQLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEED CCCHHHHHHHHHCCCHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH SLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKRERELTMVFESFGYKHGIPIDADYV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEE FDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS EEEEEECCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNM CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCC PESPEIFEQAMDNLPQAFAPQLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEED CCCHHHHHHHHHCCCHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH SLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKRERELTMVFESFGYKHGIPIDADYV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEE FDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS EEEEEECCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA