| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84626008
Identifier: 84626008
GI number: 84626008
Start: 4915391
End: 4915828
Strand: Reverse
Name: 84626008
Synonym: XOO_4351
Alternate gene names: NA
Gene position: 4915828-4915391 (Counterclockwise)
Preceding gene: 84626009
Following gene: 84626007
Centisome position: 99.51
GC content: 61.87
Gene sequence:
>438_bases ATGCGGCGGCGTCAGACCTCGAAATTCGCTCGTTGTTCGAGCATCAACCGGAGGCCGAGCATGTTTGCCGCCTCGCCATG GTTGATCGAATTGCCAATCGGGGCGGTGCATCCGGGGCTGGATACGTGGCTAGCGCAACTTGGACGCACTGCAGCCGGTG CGACGCGCCTGGCATCGGAAGTACCCTTCGACGAACTGTTCACACACTTGGAGCAACAGCTCGACGTTGAGCTGCCAGAC GGCAGCCTGGCGCTCATGCGCTTCTACGACGCGCGTGCCTGGCTGCGCTACATGGAGGTACTGACACTGGCGCAGCAATT GGAACTGCTCGGCCCGATCCTCGAATGGCAGGTCATGGCGCTTGGCCAACATTGGACGCTGTCCCGAGACGAAGCGCACA AGCTACAGGAGGCCGCCGATGCTGCAGCTGACACCTGA
Upstream 100 bases:
>100_bases CGAAGGCGCGCCACTGTTGAGCCGCACATGATGACCTGGCATCAGTTCGCGATCATCGATTGCGCCATGGATCCGGCCTA TCTCTCCACGCTGCAACATC
Downstream 100 bases:
>100_bases GCAATACGCCAAGCTCTGCCTGCCCGATCCGGGCAGCTTTTTGCCGCGTCTGGCTGCAGAAGTACGTCGTGACTACCCTG CTGCTGTGTCCAGCCGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRRRQTSKFARCSSINRRPSMFAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASEVPFDELFTHLEQQLDVELPD GSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMALGQHWTLSRDEAHKLQEAADAAADT
Sequences:
>Translated_145_residues MRRRQTSKFARCSSINRRPSMFAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASEVPFDELFTHLEQQLDVELPD GSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMALGQHWTLSRDEAHKLQEAADAAADT >Mature_145_residues MRRRQTSKFARCSSINRRPSMFAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASEVPFDELFTHLEQQLDVELPD GSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMALGQHWTLSRDEAHKLQEAADAAADT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16373; Mature: 16373
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRQTSKFARCSSINRRPSMFAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASE CCCCHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHC VPFDELFTHLEQQLDVELPDGSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQHWTLSRDEAHKLQEAADAAADT HCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRRQTSKFARCSSINRRPSMFAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASE CCCCHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHC VPFDELFTHLEQQLDVELPDGSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQHWTLSRDEAHKLQEAADAAADT HCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA