Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84626007

Identifier: 84626007

GI number: 84626007

Start: 4914348

End: 4915055

Strand: Reverse

Name: 84626007

Synonym: XOO_4350

Alternate gene names: NA

Gene position: 4915055-4914348 (Counterclockwise)

Preceding gene: 84626008

Following gene: 84626006

Centisome position: 99.49

GC content: 52.97

Gene sequence:

>708_bases
ATGGTCGCCGTACCCGTTCCGATTCCGCCGCCGCCCATCACCCGCCCCGGTGGCTGGGACCCATCACAAACAGACCCGCT
GGGCGGCCGCACGGTCGGCCAGGTCTGGAACAAGCTCAAAGACGCCTTGGGCGTGAAGCCAGATACAAAAGCCGAACCAC
GCGTGGAAGCCCGCGAGGCAGACTGCTCGCAGACCAGCAACCAGAATCAGTGCAATAGCTGCAAACTGGCACAAGGGGTG
ATGATGCCGGTCAACTATACAATCGGGCTCAAGCAATATGAAAATTTTGATTATCAGCTGCAAATTGCCAACATGAGCGC
AGCGCCAGAGCGGTTTGGCTACACCTATGGCGGCTCCACGCTGGATCGCACGCGCTTGCGTGTGTTGGGCGGGAAAAATC
AAATTACCATTTCAGAATGGAACTACTCCGGCGTCGGTTTCGACGGTTTCTGGCGAAGCAACTGCACTGCCGTTGAAGCG
AAAGCGGAGTATCAACAATTTTTCGATGAAATAGGGCGGCCAAAATGGCCATTTGTCAGGGAAAAAGTAGTGCGCGGATG
GGCCCTGCAAAAAGATCGCCAAAAAAATGTAATTATCAATGCACGCGATCCTGCAAAGCTACAATGGCATTTTAAATATT
ATTCCTGCTGGCTTGCTGCAAACCAAGCCTTTGGCGCAGATAAAATCATTTGCCATCACACACCATGA

Upstream 100 bases:

>100_bases
CTTACCAAGGTATGGTTCGCACAGACCAACACCCCCAACCTGACAGCGGCCGACTTGCTCGCCATGCTGTCATCGGATAT
CGACTGAAAGGAGCACCGCC

Downstream 100 bases:

>100_bases
AAAACCATCTAGCTCAAGTAACCATTGACGCCTATCTGCACGAAGAAAGCGCGGACGTCAAAGTTGGCTATGTTCGGCTA
AAAGCAATAGCCGACGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV
MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA
KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP

Sequences:

>Translated_235_residues
MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV
MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA
KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP
>Mature_235_residues
MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV
MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA
KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26529; Mature: 26529

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREA
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC
DCSQTSNQNQCNSCKLAQGVMMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGST
CHHCCCCCCCCCCCHHHCCEEEEEEEEEECHHHCCCCEEEEEECCCCCHHHCCEECCCCC
LDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEAKAEYQQFFDEIGRPKWPFVR
CCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCCCHHH
EKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP
HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCC
>Mature Secondary Structure
MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREA
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC
DCSQTSNQNQCNSCKLAQGVMMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGST
CHHCCCCCCCCCCCHHHCCEEEEEEEEEECHHHCCCCEEEEEECCCCCHHHCCEECCCCC
LDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEAKAEYQQFFDEIGRPKWPFVR
CCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCCCHHH
EKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP
HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA