| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84626007
Identifier: 84626007
GI number: 84626007
Start: 4914348
End: 4915055
Strand: Reverse
Name: 84626007
Synonym: XOO_4350
Alternate gene names: NA
Gene position: 4915055-4914348 (Counterclockwise)
Preceding gene: 84626008
Following gene: 84626006
Centisome position: 99.49
GC content: 52.97
Gene sequence:
>708_bases ATGGTCGCCGTACCCGTTCCGATTCCGCCGCCGCCCATCACCCGCCCCGGTGGCTGGGACCCATCACAAACAGACCCGCT GGGCGGCCGCACGGTCGGCCAGGTCTGGAACAAGCTCAAAGACGCCTTGGGCGTGAAGCCAGATACAAAAGCCGAACCAC GCGTGGAAGCCCGCGAGGCAGACTGCTCGCAGACCAGCAACCAGAATCAGTGCAATAGCTGCAAACTGGCACAAGGGGTG ATGATGCCGGTCAACTATACAATCGGGCTCAAGCAATATGAAAATTTTGATTATCAGCTGCAAATTGCCAACATGAGCGC AGCGCCAGAGCGGTTTGGCTACACCTATGGCGGCTCCACGCTGGATCGCACGCGCTTGCGTGTGTTGGGCGGGAAAAATC AAATTACCATTTCAGAATGGAACTACTCCGGCGTCGGTTTCGACGGTTTCTGGCGAAGCAACTGCACTGCCGTTGAAGCG AAAGCGGAGTATCAACAATTTTTCGATGAAATAGGGCGGCCAAAATGGCCATTTGTCAGGGAAAAAGTAGTGCGCGGATG GGCCCTGCAAAAAGATCGCCAAAAAAATGTAATTATCAATGCACGCGATCCTGCAAAGCTACAATGGCATTTTAAATATT ATTCCTGCTGGCTTGCTGCAAACCAAGCCTTTGGCGCAGATAAAATCATTTGCCATCACACACCATGA
Upstream 100 bases:
>100_bases CTTACCAAGGTATGGTTCGCACAGACCAACACCCCCAACCTGACAGCGGCCGACTTGCTCGCCATGCTGTCATCGGATAT CGACTGAAAGGAGCACCGCC
Downstream 100 bases:
>100_bases AAAACCATCTAGCTCAAGTAACCATTGACGCCTATCTGCACGAAGAAAGCGCGGACGTCAAAGTTGGCTATGTTCGGCTA AAAGCAATAGCCGACGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP
Sequences:
>Translated_235_residues MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP >Mature_235_residues MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREADCSQTSNQNQCNSCKLAQGV MMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGSTLDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEA KAEYQQFFDEIGRPKWPFVREKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26529; Mature: 26529
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREA CEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC DCSQTSNQNQCNSCKLAQGVMMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGST CHHCCCCCCCCCCCHHHCCEEEEEEEEEECHHHCCCCEEEEEECCCCCHHHCCEECCCCC LDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEAKAEYQQFFDEIGRPKWPFVR CCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCCCHHH EKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCC >Mature Secondary Structure MVAVPVPIPPPPITRPGGWDPSQTDPLGGRTVGQVWNKLKDALGVKPDTKAEPRVEAREA CEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC DCSQTSNQNQCNSCKLAQGVMMPVNYTIGLKQYENFDYQLQIANMSAAPERFGYTYGGST CHHCCCCCCCCCCCHHHCCEEEEEEEEEECHHHCCCCEEEEEECCCCCHHHCCEECCCCC LDRTRLRVLGGKNQITISEWNYSGVGFDGFWRSNCTAVEAKAEYQQFFDEIGRPKWPFVR CCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCCCHHH EKVVRGWALQKDRQKNVIINARDPAKLQWHFKYYSCWLAANQAFGADKIICHHTP HHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA