| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625991
Identifier: 84625991
GI number: 84625991
Start: 4900017
End: 4900604
Strand: Reverse
Name: 84625991
Synonym: XOO_4334
Alternate gene names: NA
Gene position: 4900604-4900017 (Counterclockwise)
Preceding gene: 84625992
Following gene: 84625990
Centisome position: 99.2
GC content: 57.48
Gene sequence:
>588_bases ATGCATGGGCGCATCATTTTCTTGCTGGAACAGCCATCAATGAAGGTTCTGCTGGATGGATTACTGCCGCGTCTGTTTCC TGGATGGCAGGAAAGCCGCGACTTTCAATGTATTGCTCACGATGGAAAGAGCGATCTTGAGCGCAGCGTGGGCAGAAAGT TAAACGCCTGGCGTGTGCCGGGAGATCGGTTTGTTGTGGTGCGTGACAACGACAGTGCCGATTGCCTGTCCCTGAAAGCC CGCCTTGTGCAACTCTGCAGTCAGCATGGGCGACCGGATGCTTTGGTCCGCCTTGTCTGCCAAGAGCTGGAAAGTTGGTA CATCGCCGATCTCAACGCATTGGCATTGGCATTTCCGGAGTGCAAGATCGATACCCCGGCGCTACGCAAGCGATTCGCCC AGCCAGACAGCTGGAAAAAGCCCTCGGCAGAGCTCGAGCGGCTCATCCCCGCGTTTCAGAAACGCAGTGGAGCGCGCCTG ATGGCTGATCGCTTGCGCGAAGAAGACAGCCGCTCGCCAAGTTTTCGCGCCTTCGTTAACGGAGTGCGACGGCTGGCACA CGAACTGGGCTACCAAGCGCCTGCATGA
Upstream 100 bases:
>100_bases GTGACTCGGAAAATCTACGCGCATTGTTCGAAGCAGGCGATCTGCCCGGATACCTTTGGAAGCAAGGCCTGTTCGAGGGC CTGAACCGGGAAGTGGCCTA
Downstream 100 bases:
>100_bases AACACCGTGCCCGTATCGCCCGCTATCGCGCCCTGCGCGAGCAGCCGCTGTGGAAACTGCTGGCGGCCGATCAGTCGCCG GAAGTGATCGGCCTGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MHGRIIFLLEQPSMKVLLDGLLPRLFPGWQESRDFQCIAHDGKSDLERSVGRKLNAWRVPGDRFVVVRDNDSADCLSLKA RLVQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPECKIDTPALRKRFAQPDSWKKPSAELERLIPAFQKRSGARL MADRLREEDSRSPSFRAFVNGVRRLAHELGYQAPA
Sequences:
>Translated_195_residues MHGRIIFLLEQPSMKVLLDGLLPRLFPGWQESRDFQCIAHDGKSDLERSVGRKLNAWRVPGDRFVVVRDNDSADCLSLKA RLVQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPECKIDTPALRKRFAQPDSWKKPSAELERLIPAFQKRSGARL MADRLREEDSRSPSFRAFVNGVRRLAHELGYQAPA >Mature_195_residues MHGRIIFLLEQPSMKVLLDGLLPRLFPGWQESRDFQCIAHDGKSDLERSVGRKLNAWRVPGDRFVVVRDNDSADCLSLKA RLVQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPECKIDTPALRKRFAQPDSWKKPSAELERLIPAFQKRSGARL MADRLREEDSRSPSFRAFVNGVRRLAHELGYQAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22221; Mature: 22221
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGRIIFLLEQPSMKVLLDGLLPRLFPGWQESRDFQCIAHDGKSDLERSVGRKLNAWRVP CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCEECC GDRFVVVRDNDSADCLSLKARLVQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPE CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CKIDTPALRKRFAQPDSWKKPSAELERLIPAFQKRSGARLMADRLREEDSRSPSFRAFVN CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH GVRRLAHELGYQAPA HHHHHHHHHCCCCCC >Mature Secondary Structure MHGRIIFLLEQPSMKVLLDGLLPRLFPGWQESRDFQCIAHDGKSDLERSVGRKLNAWRVP CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCEECC GDRFVVVRDNDSADCLSLKARLVQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPE CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CKIDTPALRKRFAQPDSWKKPSAELERLIPAFQKRSGARLMADRLREEDSRSPSFRAFVN CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH GVRRLAHELGYQAPA HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA