Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yehS [H]

Identifier: 84625928

GI number: 84625928

Start: 4828765

End: 4829238

Strand: Reverse

Name: yehS [H]

Synonym: XOO_4271

Alternate gene names: 84625928

Gene position: 4829238-4828765 (Counterclockwise)

Preceding gene: 84625929

Following gene: 84625927

Centisome position: 97.75

GC content: 64.77

Gene sequence:

>474_bases
ATGATCCACAACGATGTACTGCGCAGCATCCGCTACATGCTCGACCTCAGCGACGACAAGGTGGTGGACATCACCCACCT
GGCCGACCCCGAGTTCGCGCTCGACAAGGCGCAGGTACAGGCCTGGCTGAAAAAGGAAGACGCGCCTGGTTTCGAGCCCT
GCACCGATGCGATGCTGGCGCGCTTTCTCGACGGCCTGGTGCTGCGCTTCCGCGGCCGCGACGAGAGCCAACCGGTCCGC
CCGCTGGAAACCCGCGTCGGCAACAACCTGGTGTTGAAGAAGCTGCGCGTGGCCTTCGAACTGAAGGACGTCGACATGCA
CGCCATCTTCGCCAGCGCCGGCTTCCCGCTGTCCAAGCCGGAACTCTCCGCGCTGTTCCGCCAACCCGGCCACAAGAACT
TCCGCCCCTGCGGCGACCAACTGCTGCGCGCCTTTCTCAAAGGCCTGACCTCCCGGATGCGCGAAGCCGGTTGA

Upstream 100 bases:

>100_bases
GCCGGCGCGAGGGACTCGCTGCGCACGGTGTCAGGTCGGTTTCACTCAAGCTCCGTAGAATGGCCGCTTTCCGGCGACAG
GCCGGGGCACCGGAACGGTC

Downstream 100 bases:

>100_bases
AGCCTGGGTGATCAGATCGACCTGATTCGGCCGGTCTGAGGACACCACGACGCGGCGTCCTGCTGCTTCAACAAACCACC
AGCAAACTGTCTGGTGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKAQVQAWLKKEDAPGFEPCTDAMLARFLDGLVLRFRGRDESQPVR
PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTSRMREAG

Sequences:

>Translated_157_residues
MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKAQVQAWLKKEDAPGFEPCTDAMLARFLDGLVLRFRGRDESQPVR
PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTSRMREAG
>Mature_157_residues
MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKAQVQAWLKKEDAPGFEPCTDAMLARFLDGLVLRFRGRDESQPVR
PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTSRMREAG

Specific function: Unknown

COG id: COG4807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788443, Length=152, Percent_Identity=48.6842105263158, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009921 [H]

Pfam domain/function: PF07308 DUF1456 [H]

EC number: NA

Molecular weight: Translated: 17790; Mature: 17790

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKAQVQAWLKKEDAPGFEPCTDAMLA
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RFLDGLVLRFRGRDESQPVRPLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKP
HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCH
ELSALFRQPGHKNFRPCGDQLLRAFLKGLTSRMREAG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKAQVQAWLKKEDAPGFEPCTDAMLA
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RFLDGLVLRFRGRDESQPVRPLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKP
HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCH
ELSALFRQPGHKNFRPCGDQLLRAFLKGLTSRMREAG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]