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The map label for this gene is 84625715

Identifier: 84625715

GI number: 84625715

Start: 4577143

End: 4577688

Strand: Reverse

Name: 84625715

Synonym: XOO_4058

Alternate gene names: NA

Gene position: 4577688-4577143 (Counterclockwise)

Preceding gene: 84625716

Following gene: 84625712

Centisome position: 92.66

GC content: 61.72

Gene sequence:

>546_bases
GTGCCGGTAGGCGAGCGTGCACCGTTGCTGTGGCCCACCAAGGCCAACCCGGTGTGGTCCATGGACGTCGTGTTCGACCG
CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGC
GTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACG
GACAATTGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCC
TGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCC
CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGC
GGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAGCGATATCATCAACCCCGGACTCTAA

Upstream 100 bases:

>100_bases
CTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATTGCGAGCAGCAGCTGCAGGTC
CGCCGCCGCACGCGTAAAAG

Downstream 100 bases:

>100_bases
ACCCGACTGCTACTCAGGATGGGGGGACGTCGGACGATTACCCCGATACTCCGCCATATGCGGAGTATCGGCGGTTGGCG
TAAAGCGTCTGTCTGCAGCG

Product: ISXoo3 transposase orfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT
DNCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG
GMTPAAYAQQLANSDIINPGL

Sequences:

>Translated_181_residues
MPVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT
DNCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG
GMTPAAYAQQLANSDIINPGL
>Mature_180_residues
PVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRTD
NCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGG
MTPAAYAQQLANSDIINPGL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20513; Mature: 20382

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHG
CCCCCCCCEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEHHHHHCCCH
VVRVLDRLAHSRGLPKMIRTDNCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFN
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHC
GRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPAAYAQQLANSDIINPG
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCC
L
C
>Mature Secondary Structure 
PVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHG
CCCCCCCEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEHHHHHCCCH
VVRVLDRLAHSRGLPKMIRTDNCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFN
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHC
GRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPAAYAQQLANSDIINPG
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152895 [H]