| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is rhlB
Identifier: 84625712
GI number: 84625712
Start: 4572550
End: 4574274
Strand: Reverse
Name: rhlB
Synonym: XOO_4055
Alternate gene names: 84625712
Gene position: 4574274-4572550 (Counterclockwise)
Preceding gene: 84625715
Following gene: 84625711
Centisome position: 92.59
GC content: 68.12
Gene sequence:
>1725_bases ATGAGCGACAAACCGCTAACCGATGTGACCTTTTCCTCGTTCGACCTGCATCCGGCGTTGGTCGCCGGGCTGGAGAGCGC AGGGTTTACCCGCTGTACCCCGATCCAGGCGCTGACCTTGCCGGTCGCGCTGCCGGGCGGCGATGTCGCCGGCCAGGCCC AGACCGGCACCGGCAAGACCCTGGCGTTCCTGGTGGCGGTGATGAACCGCCTGCTGAATCGCCCGGCCCTGGCCGACCGC AAGCCCGAAGACCCGCGCGCGCTGATTCTGGCGCCGACCCGCGAACTGGCGATCCAGATCCACAAGGACGCGGTCAAGTT CGGCGCCGACCTCGGCCTGCGCTTTGCGCTGGTCTATGGCGGTGTGGACTACGACAAGCAGCGCGAACTGCTGCAACAGG GCGTGGACGTGATCATCGCCACCCCGGGCCGCCTGATCGACTACGTCAAGCAGCACAAGGTGGTGTCGCTGCACGCCTGC GAAATCTGCGTGCTGGACGAAGCCGACCGCATGTTCGACCTGGGCTTCATCAAGGACATTCGCTTCCTGCTGCGGCGCAT GCCCGAGCGTGGCACCCGGCAGACGTTGTTGTTCTCGGCCACGCTCAGCCACCGCGTGCTGGAGCTGGCTTACGAGCACA TGAACGAGCCGGAAAAGCTCGTCGTCGAGACCGAGACCATCACCGCCGCGCGGGTGCGCCAGCGCATCTATTTCCCGTCC GACGATGAGAAGCAGACGCTACTGTTGGGTTTGTTGTCGCGTAGCGAAGGCGCGCGCACGATGGTCTTCGTCAACACCAA GGCATTCGTCGAGCGCGTGGCGCGCACCCTGGAGCGGCATGGCTACCGCGTCGGCGTGCTGTCGGGCGACGTGCCGCAGA AGAAGCGCGAGTCGCTGCTCAACCGCTTCCAGAAGGGCCAGCTCGAAATCCTGGTGGCCACGGACGTGGCCGCGCGCGGT TTGCACATCGACGGCGTCAAGTACGTCTACAACTACGATCTGCCGTTCGACGCCGAAGACTACGTGCACCGCATCGGCCG CACCGCGCGTCTGGGTGAGGAAGGCGATGCGATCAGTTTCGCCTGCGAGCGCTACGCGATGAGCCTGCCGGACATCGAGG CCTACATCGAGCAGAAGATCCCGGTCGAGCCGGTGACCTCCGAGCTGCTGACGCCGTTGCCGCGTGCAGCGCGCGTGCCG GTGGAGGGCGAAGAGGCCGATGACGAGGCGGGCGACAGCGTCGGCACGATCTTCCGCGAAGCGCGTGAACAGCGTGCTGC CGAAGAACAGCGTCGTGGTGGCGGCCGCAGTGGTCCTGGCGGCGGGTCGCGCAGCGGCAGTGGTGGCGGCCGCCGCGATG GCGCCAGCGCCGGTGCCGATGGCAAGCCGCGTCCGCGCCGCAAGCCGCGGGTGGAAGGCGAAGCGCCTGCGGCTGCGGCG CAGACCGAAAAACCGGTGGTTGCTGCCGCAGCGGCGCAGGCGCCTTCCGTTGGCATGGCCGATGCCGAACGCGCACCGCG CAAGCGTCGGCGTCGTCGCAACGGTCGTCCGGTCGAAGGTGCCGAGCCGGCAGTGGCATCCACCCCGATTGCCGCGCCTG CCGCACCGCGCAAGCCCACCCAGGTGGTTGCCACGCCGGTGCGCGCGGCAAACAAGTCGTCGGGCAGCCCGTCGCTGCTC GGCCGGATCGGCCGCCGGCTGCGTTCCCTGGTCTCGGGCAACTGA
Upstream 100 bases:
>100_bases AAAGCCGCGCTGTCCGCCACAAGAGCCGCAGTTTGCGACGCTGTCGGCATCGATGCAAGCCGCGCCCGGGCTGCCCTGGG CGCCTCACGAAGACGGAATA
Downstream 100 bases:
>100_bases CCGTTTGCGGTATTGATCGCATCGCCGCGCATCGGCGGTGCGACGCAAGCACTGACGCTCCGGCATAATCGCCGAATGAC CGTTCTGCGTTTCGACAACG
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MSDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADR KPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHAC EICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS DDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARG LHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVP VEGEEADDEAGDSVGTIFREAREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAAA QTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVASTPIAAPAAPRKPTQVVATPVRAANKSSGSPSLL GRIGRRLRSLVSGN
Sequences:
>Translated_574_residues MSDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADR KPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHAC EICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS DDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARG LHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVP VEGEEADDEAGDSVGTIFREAREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAAA QTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVASTPIAAPAAPRKPTQVVATPVRAANKSSGSPSLL GRIGRRLRSLVSGN >Mature_573_residues SDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRK PEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACE ICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPSD DEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGL HIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVPV EGEEADDEAGDSVGTIFREAREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAAAQ TEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVASTPIAAPAAPRKPTQVVATPVRAANKSSGSPSLLG RIGRRLRSLVSGN
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain
Homologues:
Organism=Homo sapiens, GI222352149, Length=388, Percent_Identity=39.6907216494845, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=38.0462724935733, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=38.0462724935733, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=38.0462724935733, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=38.0462724935733, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=38.0462724935733, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=37.5661375661376, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=38.0434782608696, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=38.4180790960452, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=38.4180790960452, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI13518015, Length=363, Percent_Identity=38.5674931129477, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI216548263, Length=363, Percent_Identity=38.5674931129477, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI262118318, Length=363, Percent_Identity=38.5674931129477, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI262231852, Length=363, Percent_Identity=38.5674931129477, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=36.8, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI148613856, Length=336, Percent_Identity=40.4761904761905, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI38201710, Length=336, Percent_Identity=40.4761904761905, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI4758138, Length=362, Percent_Identity=38.6740331491713, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=37.0786516853933, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=36.8146214099217, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI7661920, Length=380, Percent_Identity=33.9473684210526, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=33.6158192090396, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=36.2880886426593, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=35.054347826087, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=35.054347826087, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI13514831, Length=385, Percent_Identity=34.5454545454545, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI41327776, Length=379, Percent_Identity=32.9815303430079, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=34.6774193548387, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=33.9473684210526, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI41327779, Length=408, Percent_Identity=35.0490196078431, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI164664518, Length=398, Percent_Identity=30.6532663316583, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI8922886, Length=394, Percent_Identity=32.48730964467, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=32.3979591836735, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=35.6200527704486, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI4503529, Length=381, Percent_Identity=32.0209973753281, Blast_Score=176, Evalue=7e-44, Organism=Homo sapiens, GI83700235, Length=380, Percent_Identity=31.5789473684211, Blast_Score=176, Evalue=7e-44, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=32.5136612021858, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI4758112, Length=390, Percent_Identity=29.7435897435897, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI18375623, Length=390, Percent_Identity=29.7435897435897, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI21040371, Length=392, Percent_Identity=30.3571428571429, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=32.3529411764706, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=30.1075268817204, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=30.1075268817204, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.4712643678161, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI17505907, Length=409, Percent_Identity=28.8508557457213, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI38327634, Length=352, Percent_Identity=31.5340909090909, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI256773275, Length=415, Percent_Identity=31.566265060241, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=28.75, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=27.5204359673025, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI154759257, Length=493, Percent_Identity=29.6146044624746, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI9966805, Length=337, Percent_Identity=31.4540059347181, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI20336298, Length=225, Percent_Identity=34.2222222222222, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=30.2670623145401, Blast_Score=116, Evalue=5e-26, Organism=Escherichia coli, GI1790214, Length=400, Percent_Identity=55.75, Blast_Score=443, Evalue=1e-125, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=40.3743315508021, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI87082221, Length=385, Percent_Identity=38.1818181818182, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1788930, Length=401, Percent_Identity=38.6533665835411, Blast_Score=232, Evalue=5e-62, Organism=Escherichia coli, GI1787605, Length=413, Percent_Identity=37.046004842615, Blast_Score=219, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71995718, Length=388, Percent_Identity=40.2061855670103, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=39.8907103825137, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=39.8907103825137, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=39.8907103825137, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.969387755102, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI86570094, Length=361, Percent_Identity=38.2271468144044, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI115533224, Length=359, Percent_Identity=36.2116991643454, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI32565321, Length=363, Percent_Identity=36.6391184573003, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17555296, Length=424, Percent_Identity=34.1981132075472, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17552642, Length=388, Percent_Identity=35.0515463917526, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=36.968085106383, Blast_Score=218, Evalue=9e-57, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=36.0742705570292, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71987143, Length=379, Percent_Identity=34.0369393139842, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507121, Length=380, Percent_Identity=33.1578947368421, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71995724, Length=380, Percent_Identity=33.1578947368421, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=36.1185983827493, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17509811, Length=362, Percent_Identity=34.2541436464088, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17537549, Length=358, Percent_Identity=35.195530726257, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999644, Length=392, Percent_Identity=33.1632653061224, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71999646, Length=392, Percent_Identity=33.1632653061224, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17552114, Length=377, Percent_Identity=31.2997347480106, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI115532548, Length=392, Percent_Identity=32.3979591836735, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI115532546, Length=392, Percent_Identity=32.3979591836735, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=30.6930693069307, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193208216, Length=427, Percent_Identity=31.615925058548, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=30.6930693069307, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=30.6930693069307, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=32.8571428571429, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=33.4183673469388, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71990816, Length=378, Percent_Identity=32.2751322751323, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=30.2521008403361, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI32564046, Length=368, Percent_Identity=33.9673913043478, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=28.6842105263158, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI193206561, Length=362, Percent_Identity=29.2817679558011, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17556951, Length=360, Percent_Identity=31.1111111111111, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25148203, Length=445, Percent_Identity=26.2921348314607, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=27.1505376344086, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71997889, Length=474, Percent_Identity=25.3164556962025, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI25148205, Length=366, Percent_Identity=25.9562841530055, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.5861027190332, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=40.7766990291262, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=28.9099526066351, Blast_Score=89, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=40.1639344262295, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=430, Percent_Identity=35.8139534883721, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=368, Percent_Identity=40.4891304347826, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=39.9449035812672, Blast_Score=236, Evalue=8e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=38.8586956521739, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=35.6353591160221, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=32.4538258575198, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=377, Percent_Identity=32.3607427055703, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=35.4929577464789, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=353, Percent_Identity=33.7110481586402, Blast_Score=192, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=34.2857142857143, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=441, Percent_Identity=30.3854875283447, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=33.4261838440111, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=366, Percent_Identity=31.6939890710383, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=385, Percent_Identity=31.4285714285714, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=385, Percent_Identity=31.4285714285714, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=383, Percent_Identity=31.8537859007833, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=418, Percent_Identity=31.1004784688995, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=29.1666666666667, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=377, Percent_Identity=30.5039787798408, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=30.9782608695652, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=27.6029055690073, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=405, Percent_Identity=28.8888888888889, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=465, Percent_Identity=28.6021505376344, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=415, Percent_Identity=24.0963855421687, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=400, Percent_Identity=22.75, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=38.9784946236559, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI21356161, Length=436, Percent_Identity=35.5504587155963, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=40, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.4401114206128, Blast_Score=245, Evalue=7e-65, Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=38.1081081081081, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=35.9605911330049, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=37.940379403794, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI17985987, Length=397, Percent_Identity=38.7909319899244, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=38.6819484240688, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=35.6948228882834, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24645031, Length=380, Percent_Identity=33.1578947368421, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI21355075, Length=383, Percent_Identity=36.2924281984334, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI281365720, Length=321, Percent_Identity=38.006230529595, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI17136814, Length=386, Percent_Identity=34.1968911917098, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=33.5195530726257, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=32.972972972973, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=33.0555555555556, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=33.0555555555556, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=32.6259946949602, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=32.6259946949602, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=32.6259946949602, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=32.6259946949602, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=31.9327731092437, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=31.9327731092437, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI21355559, Length=417, Percent_Identity=33.5731414868106, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=30.9973045822102, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=28.780487804878, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=29.8050139275766, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24666101, Length=371, Percent_Identity=31.266846361186, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=29.81220657277, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI17647335, Length=397, Percent_Identity=29.4710327455919, Blast_Score=148, Evalue=9e-36, Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=29.1891891891892, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=30.9090909090909, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24640164, Length=371, Percent_Identity=27.2237196765499, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI17136666, Length=411, Percent_Identity=26.2773722627737, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859659, Length=243, Percent_Identity=30.4526748971193, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571338, Length=243, Percent_Identity=30.4526748971193, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RHLB_XANOR (Q5GUR8)
Other databases:
- EMBL: AE013598 - RefSeq: YP_202940.2 - ProteinModelPortal: Q5GUR8 - SMR: Q5GUR8 - GeneID: 3263259 - GenomeReviews: AE013598_GR - KEGG: xoo:XOO4301 - NMPDR: fig|291331.3.peg.3828 - HOGENOM: HBG737336 - OMA: GYQGNRS - ProtClustDB: PRK04537 - BioCyc: XORY291331:XOO4301-MONOMER - HAMAP: MF_00661 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022077 - InterPro: IPR000629 - InterPro: IPR014014 - SMART: SM00487 - SMART: SM00490
Pfam domain/function: PF00270 DEAD; PF12300 DUF3628; PF00271 Helicase_C
EC number: =3.6.4.13
Molecular weight: Translated: 62313; Mature: 62182
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH LAFLVAVMNRLLNRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEC GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHHH RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCC DDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL CCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF HHHCCCCEEEEEEECHHHCCEEECCEEEEEECCCCCCHHHHHHHCCCHHCCCCCCCHHHH ACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVPVEGEEADDEAGDSVGTIFRE HHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVASTPIAAPAAPRKPT CCCCCEEEHHHCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVVATPVRAANKSSGSPSLLGRIGRRLRSLVSGN HHEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH LAFLVAVMNRLLNRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEC GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHHH RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCC DDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL CCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF HHHCCCCEEEEEEECHHHCCEEECCEEEEEECCCCCCHHHHHHHCCCHHCCCCCCCHHHH ACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVPVEGEEADDEAGDSVGTIFRE HHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QTEKPVVAAAAAQAPSVGMADAERAPRKRRRRRNGRPVEGAEPAVASTPIAAPAAPRKPT CCCCCEEEHHHCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVVATPVRAANKSSGSPSLLGRIGRRLRSLVSGN HHEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA